VIMSS217153 has 401 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-15 41.8 0.4 5e-14 38.4 0.0 2.1 2 VIMSS217153
Domain annotation for each sequence (and alignments):
>> VIMSS217153
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.1 0.2 0.015 0.015 4 24 .. 14 34 .. 11 39 .. 0.81
2 ! 38.4 0.0 5e-14 5e-14 81 154 .. 72 147 .. 47 171 .. 0.80
Alignments for each domain:
== domain 1 score: 1.1 bits; conditional E-value: 0.015
CNNM 4 llllllsaffsaaEtAlvsls 24
+l ll sa+f a+E+A ++l+
VIMSS217153 14 ALALLWSALFTAVEAARLQLN 34
456689**********87776 PP
== domain 2 score: 38.4 bits; conditional E-value: 5e-14
CNNM 81 e...galavviatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkke 154
+ g+ ++++a ++ tl +lvf+E lP++la++n+++++++ a +l+v ll Pl++ll+ a+lilr ++ +
VIMSS217153 72 QrqsGEHGFWLAGLAATLTLLVFAEYLPRRLARRNPQAFVSLGASLLKVPLALLQPLACLLDGAAKLILRPFRA-QP 147
1455788999999999*****************************************************98876.22 PP
Or compare VIMSS217153 to CDD or PaperBLAST