VIMSS33614 has 345 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.2e-47 145.3 3.7 1.1e-46 144.9 3.7 1.1 1 VIMSS33614
Domain annotation for each sequence (and alignments):
>> VIMSS33614
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 144.9 3.7 1.1e-46 1.1e-46 1 181 [] 8 198 .. 8 198 .. 0.98
Alignments for each domain:
== domain 1 score: 144.9 bits; conditional E-value: 1.1e-46
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae........galavviatv 91
l+alll+ ++aff++aE+Al+s+++ rle+lae+g++ a ++ + e++ +L+ ++g+t+ +ill+ ++++++++ll+ al +++++
VIMSS33614 8 LLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSILLGRVGEPAVVKLLQLsfglsgvpPALLHTLSLA 106
5789***************************************************************************98********889999**** PP
CNNM 92 ivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvieeee 181
iv+ l++++GE++Pk++al+ +e++a++++pp v ++l +P++++ n +an+ilrl+Gv k+e + av+ el ++++es +eG +++ee
VIMSS33614 107 IVVALHVLLGEMVPKNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVqpKDELDIAVSTAELSEMIAESLSEGLLDHEE 198
*****************************************************************************************998 PP
Or compare VIMSS33614 to CDD or PaperBLAST