VIMSS341048 has 426 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.1e-58 182.5 2.2 4.4e-58 182.0 2.2 1.1 1 VIMSS341048
Domain annotation for each sequence (and alignments):
>> VIMSS341048
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 182.0 2.2 4.4e-58 4.4e-58 3 171 .. 13 181 .. 10 187 .. 0.96
Alignments for each domain:
== domain 1 score: 182.0 bits; conditional E-value: 4.4e-58
CNNM 3 allllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvf 100
++ l+++s+ fs++Et+++sl+++rl++la++g+kgakr++kll++p+rl+ +lign+lvnil+sa+at + ++l+ g+l+v+iat+++t+++lvf
VIMSS341048 13 LACLIVISGYFSGSETGMMSLNRYRLKHLAKSGHKGAKRVEKLLDRPDRLIGLILIGNNLVNILASAIATIIGMRLY--GDLGVAIATGALTMVVLVF 108
45567************************************************************************..89***************** PP
CNNM 101 GEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslvees 171
+E++Pkt+a+ ++e+++ a++ +l +l+++l+Plv+l+n ++n+++rllGv + e+ +++eelr++v+e+
VIMSS341048 109 AEVTPKTVAALYPERVSYASSILLTILMKVLSPLVMLVNFITNGFIRLLGVkaDHTVEDHLSSEELRTVVNEA 181
***************************************************9888889************986 PP
Or compare VIMSS341048 to CDD or PaperBLAST