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Align VIMSS354942 to PF01595 (DUF21)

VIMSS354942 has 459 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.3e-52  162.5   2.5    6.3e-52  162.0   2.5    1.2  1  VIMSS354942  


Domain annotation for each sequence (and alignments):
>> VIMSS354942  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  162.0   2.5   6.3e-52   6.3e-52       1     176 []      16     202 ..      16     202 .. 0.96

  Alignments for each domain:
  == domain 1  score: 162.0 bits;  conditional E-value: 6.3e-52
        DUF21   1 liivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae........galavviat 90 
                  l++v+l++++af+++aE+A+vs++++r+e++ae+g++ka++llk+l++p+++Lst+++g+tlvnil++a ++ ++++ la+        ++la++i++
  VIMSS354942  16 LLLVVLTFINAFLAAAEIAVVSVNKNRVEQKAEDGDAKAQKLLKVLQDPNNFLSTIQVGITLVNILSGASLAETLSSRLAPvlgggaaaKSLASIIIL 113
                  578999***************************************************************9999999999999**************** PP

        DUF21  91 vivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil......esesepavseeelkklveeseeegvieeee 176
                  +++t++ +vfgE+ Pk++a++++e++a ++++ +r+l v+ +P+vwlls++++l+        ++ ++ ++++e+++++e     gv+e+ee
  VIMSS354942 114 ALLTYVSIVFGELYPKRIAMNKSEEVAQLTSGAVRFLGVIARPFVWLLSASTDLLSkitpmtFDDADSKMTRDEMRYMLETE---GVLENEE 202
                  *******************************************************************************876...7777765 PP



Or compare VIMSS354942 to CDD or PaperBLAST