VIMSS3565347 has 439 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.7e-49 151.6 3.2 9.7e-49 151.6 3.2 1.8 2 VIMSS3565347
Domain annotation for each sequence (and alignments):
>> VIMSS3565347
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 151.6 3.2 9.7e-49 9.7e-49 2 181 .] 9 199 .. 8 199 .. 0.98
2 ? -0.9 0.0 0.058 0.058 55 81 .. 319 345 .. 313 366 .. 0.70
Alignments for each domain:
== domain 1 score: 151.6 bits; conditional E-value: 9.7e-49
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae...........galavv 87
+++ll++ s ffs +E++l + +k++l+ +a++gn++a+++l l ++p ++ ++++ig + v il ++l++++++ +++ g+++++
VIMSS3565347 9 LLMLLVAGSVFFSLSEISLAASRKIKLQVMADEGNRHAAKVLALQAQPGNFFTVVQIGLNTVAILGGILGESALNPAIKGfisgfyqgpwlGQISSA 105
679999************************************************************************99***************** PP
CNNM 88 iatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
+++v+vt +++++++++Pk+la+ +e+ia++v++p+ ++++ll+Plvw++n +an+++rll+v+ +++++t++++ +++++++e Gvi++ee
VIMSS3565347 106 ASFVFVTGMFILIADLMPKRLAMTMPERIAVVVVRPMLLCVTLLMPLVWFFNGMANALFRLLRVSMIRNDEITSDDIYAVMDAGAEAGVIQREE 199
******************************************************************************************9997 PP
== domain 2 score: -0.9 bits; conditional E-value: 0.058
CNNM 55 tlligntlvnillsalatalfaellae 81
+l++g+ n l+s+++++ ++++++e
VIMSS3565347 319 ALVVGIVTMNDLMSTVMGEWATHVVEE 345
466777777777777777777777765 PP
Or compare VIMSS3565347 to CDD or PaperBLAST