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Align VIMSS3565347 to PF01595 (DUF21)

VIMSS3565347 has 439 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.4e-43  134.8   2.8    1.4e-43  134.8   2.8    1.6  2  VIMSS3565347  


Domain annotation for each sequence (and alignments):
>> VIMSS3565347  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  134.8   2.8   1.4e-43   1.4e-43       2     176 .]       9     199 ..       8     199 .. 0.98
   2 ?   -2.5   0.0       0.2       0.2      56      81 ..     320     345 ..     317     360 .. 0.72

  Alignments for each domain:
  == domain 1  score: 134.8 bits;  conditional E-value: 1.4e-43
         DUF21   2 iivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae...........galavv 87 
                   +++ll+++s ffs +E++l + ++++l+ +a++g+++a+++l l ++p ++ ++++ig + v il ++l++++++  ++            g+++++
  VIMSS3565347   9 LLMLLVAGSVFFSLSEISLAASRKIKLQVMADEGNRHAAKVLALQAQPGNFFTVVQIGLNTVAILGGILGESALNPAIKGfisgfyqgpwlGQISSA 105
                   678999*******************************************************************9999999999************** PP

         DUF21  88 iatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.....esesepavseeelkklveeseeegvieeee 176
                   +++v+vt +++++++++Pk+la+  +e+ia ++++p+ ++ +ll+Plvw+++ ++n++      +  +++ ++++++ +++++++e+gvi++ee
  VIMSS3565347 106 ASFVFVTGMFILIADLMPKRLAMTMPERIAVVVVRPMLLCVTLLMPLVWFFNGMANALFrllrvSMIRNDEITSDDIYAVMDAGAEAGVIQREE 199
                   ****************************************************************999***********************9997 PP

  == domain 2  score: -2.5 bits;  conditional E-value: 0.2
         DUF21  56 lligntlvnillsalatalfvellae 81 
                   l++g+   n l+s++++  ++++++e
  VIMSS3565347 320 LVVGIVTMNDLMSTVMGEWATHVVEE 345
                   67888888888888777777777765 PP



Or compare VIMSS3565347 to CDD or PaperBLAST