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Align VIMSS535487 to PF01595 (DUF21)

VIMSS535487 has 454 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.3e-39  121.8   0.7    2.1e-39  121.2   0.7    1.2  1  VIMSS535487  


Domain annotation for each sequence (and alignments):
>> VIMSS535487  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.2   0.7   2.1e-39   2.1e-39       2     174 ..      12     203 ..      11     205 .. 0.98

  Alignments for each domain:
  == domain 1  score: 121.2 bits;  conditional E-value: 2.1e-39
        DUF21   2 iivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae............galavv 87 
                  +i +l++++a+f++aE++l++l+r+++e+ a++g ++ + +++ ++++++ Ls +++g++ ++++++ l+++++++l ++            +a+ ++
  VIMSS535487  12 AIAVLIFGNAVFVAAEFSLTTLDRSTVEANARTGGRRDRWIRRAHHRLSFQLSGAQLGISATTLAAGYLTDPMVEDLPHPwldavgipdrvgDAIMAF 109
                  578999**********************************************************************9999****************** PP

        DUF21  88 iatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.......esesepavseeelkklveeseeegviee 174
                  +a++ivt + +vfgE++Pk la++++ ++a+a++    +++ ll+P+++l +  +n+i+        +e ++a s++el +lv++s+++g++++
  VIMSS535487 110 LALLIVTSVSMVFGELVPKYLAVARPMSTARAVVAAQLLFSALLTPAIRLTNGAANWIVrrlgvepAEELRSARSPQELLSLVRSSARSGALDA 203
                  ******************************************************************99**********************9986 PP



Or compare VIMSS535487 to CDD or PaperBLAST