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Align VIMSS5916320 to PF01595 (DUF21)

VIMSS5916320 has 467 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-38  118.8   1.8    1.6e-38  118.3   1.8    1.2  1  VIMSS5916320  


Domain annotation for each sequence (and alignments):
>> VIMSS5916320  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  118.3   1.8   1.6e-38   1.6e-38       5     174 ..      17     205 ..      12     207 .. 0.96

  Alignments for each domain:
  == domain 1  score: 118.3 bits;  conditional E-value: 1.6e-38
         DUF21   5 lllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae............galavvia 89 
                   ++++l+++f++ E+A++s++r++l++la++g+kka+r+l+++k+ +++Ls +++g+t++ +l + +a++l+++ l+              +++ v+a
  VIMSS5916320  17 VIIVLNGYFVAQEFAYMSVDRNELRALADSGDKKARRALSITKRTSFMLSGAQLGITVTGLLVGFVAEPLVGNALGVllggvgvpaavsISVGTVLA 113
                   6779***********************************************************************99*******9998877888888 PP

         DUF21  90 tvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.......esesepavseeelkklveeseeegviee 174
                   ++i t++ ++fgE++Pk++ l+ ++k alalap + ++++l  +l+ +++  +n++l        ++ ++  + ++l ++v++s+++gv+++
  VIMSS5916320 114 LAISTVVQMIFGELFPKNYTLATPLKSALALAPSTTWYLKLAGWLITFFDFASNALLrlfriepVEDVDSSATAQDLPHIVASSRDSGVLNN 205
                   8999************************************************************99***********************986 PP



Or compare VIMSS5916320 to CDD or PaperBLAST