VIMSS5916580 has 354 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-54 169.2 2.9 4.8e-54 168.8 2.9 1.1 1 VIMSS5916580
Domain annotation for each sequence (and alignments):
>> VIMSS5916580
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 168.8 2.9 4.8e-54 4.8e-54 1 181 [] 8 202 .. 8 202 .. 0.99
Alignments for each domain:
== domain 1 score: 168.8 bits; conditional E-value: 4.8e-54
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............gala 85
l++++ll ++aff+aaE+Al+s ++ rl++l+ +g+kga+++l +e+++ +L+ ++g+t+++++l+ +a++++a++++ ++++
VIMSS5916580 8 LLIIVLLSANAFFVAAEFALISSRRDRLDSLVSQGKKGAEKVLYATEHLSIMLAGAQFGITVCSLILGKVAEPAIAHFIEVpftswgvpndliHPIS 104
5789999************************************************************************99**************** PP
CNNM 86 vviatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvieee 180
+via++i+t l+++fGE++Pk++a++ +e++ +++ap+l ++++++Pl+ ++n++a+l lr +Gv k+e +++v++e+l s+++es++eG +++e
VIMSS5916580 105 FVIALAIITWLHILFGEMVPKNIAIAGPETLGMWLAPVLIAFVKITRPLIEFMNWIARLTLRAFGVeqKNELDSTVDPEQLASMISESRSEGLLDAE 201
**********************************************************************************************999 PP
CNNM 181 e 181
e
VIMSS5916580 202 E 202
7 PP
Or compare VIMSS5916580 to CDD or PaperBLAST