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Align VIMSS5916580 to PF01595 (DUF21)

VIMSS5916580 has 354 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.1e-49  154.6   3.0    1.5e-49  154.3   3.0    1.1  1  VIMSS5916580  


Domain annotation for each sequence (and alignments):
>> VIMSS5916580  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.3   3.0   1.5e-49   1.5e-49       1     176 []       8     202 ..       8     202 .. 0.99

  Alignments for each domain:
  == domain 1  score: 154.3 bits;  conditional E-value: 1.5e-49
         DUF21   1 liivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae............gala 85 
                   l+i++ll ++aff++aE+Al+s +r rl++l+ +gkk+a+++l  +++++ +L+ +++g+t+++++l+ +a+++++++++             + ++
  VIMSS5916580   8 LLIIVLLSANAFFVAAEFALISSRRDRLDSLVSQGKKGAEKVLYATEHLSIMLAGAQFGITVCSLILGKVAEPAIAHFIEVpftswgvpndliHPIS 104
                   57899999***********************************************************************99**************** PP

         DUF21  86 vviatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.......esesepavseeelkklveeseeegvieee 175
                   +via++i+t l+++fgE++Pk++a++ +e++ ++lap+l  + ++++Pl+ +++++++l l       ++e +++v++e+l ++++es++eg +++e
  VIMSS5916580 105 FVIALAIITWLHILFGEMVPKNIAIAGPETLGMWLAPVLIAFVKITRPLIEFMNWIARLTLrafgveqKNELDSTVDPEQLASMISESRSEGLLDAE 201
                   ***********************************************************************************************99 PP

         DUF21 176 e 176
                   e
  VIMSS5916580 202 E 202
                   8 PP



Or compare VIMSS5916580 to CDD or PaperBLAST