VIMSS661782 has 444 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-55 172.9 7.2 4.5e-55 172.2 7.2 1.3 1 VIMSS661782
Domain annotation for each sequence (and alignments):
>> VIMSS661782
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 172.2 7.2 4.5e-55 4.5e-55 1 181 [] 7 202 .. 7 202 .. 0.98
Alignments for each domain:
== domain 1 score: 172.2 bits; conditional E-value: 4.5e-55
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae..............gal 84
+i++ll+++++ff++aE+Alvs++++rleel +++++ a ++ ++++ +Ls++++g+t++++ll+++++ ++++l + l
VIMSS661782 7 FIIVLLIFANGFFVSAEFALVSIRPSRLEELIKENKPLAFITKRAAQKLNDMLSVCQVGITIASLLLGWVGEGYVSRWLIFllemfgysaneatvHGL 104
588**************************************************************************99669999************* PP
CNNM 85 avviatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.kkeeepavteeelrslveeseeeGvieeee 181
a++i+++i+t+l++++GE+lPkt+a++n e+ial+++ pl ++++l+yP++++ln ++ ++l+l+G+ ++++ ++++eel+ ++ee++++G i++ee
VIMSS661782 105 AITISFTIITFLHILLGELLPKTVAIQNTETIALFISIPLFFFYYLFYPITFFLNEMTSFLLKLIGIeANKSRMMHSPEELMIIIEEQNKQGKIDQEE 202
**********************************************************************************************9997 PP
Or compare VIMSS661782 to CDD or PaperBLAST