W6USS8 has 717 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-35 107.2 0.1 7.8e-35 106.2 0.1 1.5 1 W6USS8
Domain annotation for each sequence (and alignments):
>> W6USS8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 106.2 0.1 7.8e-35 7.8e-35 1 181 [] 162 333 .. 162 333 .. 0.92
Alignments for each domain:
== domain 1 score: 106.2 bits; conditional E-value: 7.8e-35
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgn....kgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilv 99
+++++l+ ls++fs+++++l++l+k++l+ +g+ ++ak++ +++e+ + lL t+l+gn vn++l++l++ l + l a+++ tl i
W6USS8 162 ILIIILFSLSGLFSGLNLGLMALDKTELKIIETAGDpdekRYAKAIRPVREKGNLLLCTILLGNVTVNTSLTILMDNLTGSGL--------FAVIASTLGITM 256
6789999*********************76666666555599999******************************99976655........355666****** PP
CNNM 100 fGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
fGEilP++++ ++ ++i ++++++r+++++++Pl+++++++++++l +++ ++++++e l l++e++ G + ++e
W6USS8 257 FGEILPQAICSRHGLAIGAKTIWLTRFFMVVTFPLAFPISYVLDKML-----GEDLGQVYSKEKLGVLLKEQQDAGLVAPDE 333
***********************************************.....9***********************998876 PP
Or compare W6USS8 to CDD or PaperBLAST