PaperBLAST – Find papers about a protein or its homologs

 

Align WP_010373982.1 to PF01595 (DUF21)

WP_010373982.1 has 456 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-42  129.6   5.0    6.9e-42  129.3   5.0    1.1  1  WP_010373982.1  


Domain annotation for each sequence (and alignments):
>> WP_010373982.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  129.3   5.0   6.9e-42   6.9e-42       2     175 ..      13     204 ..      11     205 .. 0.94

  Alignments for each domain:
  == domain 1  score: 129.3 bits;  conditional E-value: 6.9e-42
           DUF21   2 iivlllllsaffsgaEtAlvslsrlrleelaekgkkkakr...llkllknperlLstlligntlvnillsalatalfvellae.........gal 84 
                     +i+++lll+ +f   E +lv+++++ l++l+e++k+ +k    + +++++  ++Lst+++g+tl++++l++l++a++++l+           +++
  WP_010373982.1  13 VIIIILLLAVLFTLTEYSLVKVRPSALRALQEARKRPSKNlthAINMTHHMTEYLSTAQVGITLTSLILGWLGEAFIASLIISsgvlppaiaHSV 107
                     4567779**************************996666645588899999****************************99889*******9999 PP

           DUF21  85 avviatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil......esesepavseeelkklveeseeegvie 173
                     a+++a++i+t+++ vf++++Pk++a+ ++ k++l++++p+ +++++lyPl+wl+++ + +++       + +e+ +se+e+ +l + ++++g+i+
  WP_010373982.1 108 ASIAAILIFTFIHAVFTDLVPKNIAIDQPVKVLLFIVRPVMFFHIVLYPLIWLFDRTAAGVTkllgfnAHPDEDIYSENEILSLSKDAADAGEID 202
                     999999999***********************************************************99************************9 PP

           DUF21 174 ee 175
                     ee
  WP_010373982.1 203 EE 204
                     97 PP



Or compare WP_010373982.1 to CDD or PaperBLAST