PaperBLAST – Find papers about a protein or its homologs

 

Align WP_014335181.1 to PF01595 (DUF21)

WP_014335181.1 has 443 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-49  154.1   3.8    2.4e-49  153.6   3.8    1.2  1  WP_014335181.1  


Domain annotation for each sequence (and alignments):
>> WP_014335181.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  153.6   3.8   2.4e-49   2.4e-49       2     175 ..      14     199 ..      12     202 .. 0.94

  Alignments for each domain:
  == domain 1  score: 153.6 bits;  conditional E-value: 2.4e-49
           DUF21   2 iivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae........galavvi 88 
                     ++++l+ll+affs++E+Alvsl+r+r+e++ae+g+kk  rll++l++p+++Lst+++g+t++ +l +a ++a ++ +++         +++++vi
  WP_014335181.1  14 LLLILTLLNAFFSASEMALVSLNRSRVEQKAEEGNKKYIRLLSVLEKPNNFLSTIQVGITFIGLLQGASLSASLGGVISSwfgnyvwaKTAGSVI 108
                     557888**************************************************************9999977777777888****99***** PP

           DUF21  89 atvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil......esesepavseeelkklveeseeegvieee 175
                     ++v++t++ +v+gE+ Pk++a++ +e +a ++ap++ ++ +l++P+vwlls+++nl+        ++ ++ ++++e++++++ see    ++e
  WP_014335181.1 109 SLVFLTYISIVLGELYPKRIAMNLKENLAVISAPVIILIGKLVSPFVWLLSASTNLLSritpmtFDDADEKMTRDEIEYMLTNSEETL--DTE 199
                     ************************************************************************************9984..444 PP



Or compare WP_014335181.1 to CDD or PaperBLAST