PaperBLAST – Find papers about a protein or its homologs

 

Align WP_036162133.1 to PF01595 (DUF21)

WP_036162133.1 has 446 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.4e-50  156.8   4.8    3.5e-50  156.3   4.8    1.2  1  WP_036162133.1  


Domain annotation for each sequence (and alignments):
>> WP_036162133.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.3   4.8   3.5e-50   3.5e-50       2     176 .]       9     202 ..       8     202 .. 0.97

  Alignments for each domain:
  == domain 1  score: 156.3 bits;  conditional E-value: 3.5e-50
           DUF21   2 iivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae............gal 84 
                     i+ +l++l +ff++ E+A+v+++++rl++l ++g+kka ++++++++++++Ls++++g+t++ ++++++++++f+ +l++            + +
  WP_036162133.1   9 IFTILIALTGFFVATEFAIVKVRSSRLDQLIAEGHKKAIAAKQVVNHLDEYLSACQLGITVTALGIGMVGEKTFEFMLHPlfemigisdkymTIF 103
                     7899**************************************************************************99*******99887777 PP

           DUF21  85 avviatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.......esesepavseeelkklveeseeegvi 172
                      +  a++i t+l++v+gE++Pk+ a+++ae+i l++a p+ ++++++yP++w+l+ ++++++        se+e  ++eeel+ l++es ++g+i
  WP_036162133.1 104 TIGTAFAIATFLHVVVGELAPKTAAIQKAETITLLFAKPIMFFYKIMYPFIWFLNGSARVLIglfgmkpASEHELSHTEEELRLLLSESFKSGEI 198
                     777777888************************************************************99************************ PP

           DUF21 173 eeee 176
                     +++e
  WP_036162133.1 199 NKTE 202
                     9987 PP



Or compare WP_036162133.1 to CDD or PaperBLAST