PaperBLAST – Find papers about a protein or its homologs

 

Align WP_081078434.1 to PF01595 (DUF21)

WP_081078434.1 has 427 amino acids

Query:       DUF21  [M=176]
Accession:   PF01595.20
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.3e-52  161.4   2.9    1.5e-51  160.7   2.9    1.2  1  WP_081078434.1  


Domain annotation for each sequence (and alignments):
>> WP_081078434.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.7   2.9   1.5e-51   1.5e-51       2     174 ..       5     194 ..       4     196 .. 0.97

  Alignments for each domain:
  == domain 1  score: 160.7 bits;  conditional E-value: 1.5e-51
           DUF21   2 iivlllllsaffsgaEtAlvslsrlrleelaekgkkkakrllkllknperlLstlligntlvnillsalatalfvellae............gal 84 
                     ii+ll+ll+++fs++E+Al+s++++rle+ a+kg+ +ak++l+l + p+++Lst++ig+tl+ il++++ ++ +++ +++            ++l
  WP_081078434.1   5 IIFLLILLNGVFSMSEIALISARKNRLETAAKKGNTSAKTALDLANSPNKFLSTVQIGITLIGILTGIYSGDKITHDVQAffasypvtvpysKSL 99 
                     789999**************************************************************9999989888889999********999 PP

           DUF21  85 avviatvivtllilvfgEilPkslalkyaekialalapplrvlmvllyPlvwllskllnlil.....esesepavseeelkklveeseeegviee 174
                     +  +++v +t++ lv+gE+lPk+++l+y+e+ia+a+a+p+++++v ++P++wll+ ++++il     +   +  v+eee+k++++e++e g+++e
  WP_081078434.1 100 GTGVVVVMLTFFSLVLGELLPKRIGLNYPETIAKAVAVPMKMISVATAPFIWLLTSSTEFILkvlniKPTADGKVTEEEIKAIIKEGTEGGEVQE 194
                     999*99999**********************************************************************************9977 PP



Or compare WP_081078434.1 to CDD or PaperBLAST