XP_002906198.1 has 298 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-36 111.2 3.5 2.3e-36 111.2 3.5 1.5 2 XP_002906198.1
Domain annotation for each sequence (and alignments):
>> XP_002906198.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.1 0.1 0.27 0.27 12 41 .. 9 38 .. 4 50 .. 0.71
2 ! 111.2 3.5 2.3e-36 2.3e-36 2 181 .] 56 233 .. 55 233 .. 0.93
Alignments for each domain:
== domain 1 score: -3.1 bits; conditional E-value: 0.27
CNNM 12 ffsaaEtAlvslsklrleelaekgnkgakr 41
+f aa t+lv+ + ++ e +e++ ++a++
XP_002906198.1 9 LFRAASTSLVARRITDAVEDQEASGANADT 38
666777788877777777777776666655 PP
== domain 2 score: 111.2 bits; conditional E-value: 2.3e-36
CNNM 2 iallllllsaffsaaEtAlvslsklrl..............eelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaeg 82
+++ll+++sa+ s+++++l+sl+k+ l +e+++ + a+r+l+++++++ lL+tl++ vn lls+l++ l + l++
XP_002906198.1 56 AIVLLIIMSAISSGLTLGLMSLDKVSLdvivragerpgatkDEMKK--ARAARRILPVRADSNLLLTTLVLTTVAVNSLLSILMADLTSGLVG-- 146
579999********************************95444444..489****************************************96.. PP
CNNM 83 alavviatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvi 177
+++ t+lil++GEi+P++l+ ++a++i ++++p++rvl i ly ++++++++++ + +++ ++++t+ el++lve++ ++ ++
XP_002906198.1 147 -------FFASTILILICGEIVPQSLCSRHALAIGSMFVPVVRVLRIMLYIFAKPVSYVLDRTV-----GEDVGTVFTKRELQKLVEIHVRQKIM 229
.......6777*****************************************************.....9*******************999887 PP
CNNM 178 eeee 181
+ee
XP_002906198.1 230 HPEE 233
7665 PP
Or compare XP_002906198.1 to CDD or PaperBLAST