PaperBLAST – Find papers about a protein or its homologs

 

Align WP_049588375.1 to PF01861 (BpsA_C)

WP_049588375.1 has 279 amino acids

Query:       BpsA_C  [M=243]
Accession:   PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.2e-22   66.4   0.0    1.5e-22   66.1   0.0    1.1  1  WP_049588375.1  


Domain annotation for each sequence (and alignments):
>> WP_049588375.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.1   0.0   1.5e-22   1.5e-22       3     195 ..       9     213 ..       7     262 .. 0.81

  Alignments for each domain:
  == domain 1  score: 66.1 bits;  conditional E-value: 1.5e-22
          BpsA_C   3 lekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslala.......LtglpkkvvvvDiDeRlikfiervakel 90 
                     ++ ++ ++ +RP + +e+Dq ++     v  ++++      +gk+++++Gd D ++l++a       ++  pk + ++D DeR+++ + r+ ++l
  WP_049588375.1   9 INSISDVVMNRPAPLREFDQIYMKVADMVIQAEYVARVF--DGKKVVFVGDGDGIALSAAhlkaqevISYGPKSITLLDFDERIVNSVRRFGEKL 101
                     56788999**************************99875..59**********9999765333333356679**********************9 PP

          BpsA_C  91 glk..ieaivyDlrkplpeelkekFdvfitDPpetv....ealkaFlgRGiaaLkgegcagYlgltrres...sldkWkeiqrlllemgvvitdl 176
                     + k  i a+ y++ +plp e   ++d f  +Pp +     +++ aFl RG +a ++ g  g + ++ ++    + +  ++ q   +e g v++++
  WP_049588375.1 102 APKieITAHLYNVADPLPAEHFGAYDGFHINPPWGAsnggQSVTAFLERGSQATNERG-LGIVVIADNPDlpwTQEVLRDTQLRAIELGYVVAEM 195
                     87723667889*********************9765222268*********9988777.999999987632214556678899999********* PP

          BpsA_C 177 irnFneYenweykeetraa 195
                      ++ + Y+  + ++++r  
  WP_049588375.1 196 LPQLHLYHL-DDAPDLRSC 213
                     ******986.556666655 PP



Or compare WP_049588375.1 to CDD or PaperBLAST