biolip::2qm3A has 338 amino acids
Query: BpsA_C [M=243]
Accession: PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-125 403.7 0.2 1.5e-125 403.4 0.2 1.1 1 biolip::2qm3A
Domain annotation for each sequence (and alignments):
>> biolip::2qm3A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 403.4 0.2 1.5e-125 1.5e-125 1 237 [. 101 338 .] 101 338 .] 0.99
Alignments for each domain:
== domain 1 score: 403.4 bits; conditional E-value: 1.5e-125
BpsA_C 1 dllekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslalaLtglpkkvvvvDiDeRlikfiervakelglk.ie 95
dlle+frei+kdRPe+ +e+Dq++vtpettvaRv+l+++rGDLe+k+i+vlGdDDLts+al+L+glpk+++v+DiDeRl+kfie++a+e+g++ ie
biolip::2qm3A 101 DLLEQFREIVKDRPEPLHEFDQAYVTPETTVARVILMHTRGDLENKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEdIE 196
79********************************************************************************************** PP
BpsA_C 96 aivyDlrkplpeelkekFdvfitDPpetvealkaFlgRGiaaLkgegcagYlgltrressldkWkeiqrlll.emgvvitdlirnFneYenweyke 190
++++Dlrkplp+++++kFd+fitDPpet+ea++aF+gRGia+Lkg +cagY+g+trressldkW+eiq+lll e++vvitd+irnFneY+nw+y+e
biolip::2qm3A 197 IFTFDLRKPLPDYALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLnEFNVVITDIIRNFNEYVNWGYAE 292
***********************************************************************99*********************** PP
BpsA_C 191 etraakllpvkkkpekiwyksalfrietlkgkrkveeevkkveelyk 237
etra+kl+p+kk pe++wyks++frietl+g+r++e+e+ + e++y+
biolip::2qm3A 293 ETRAWKLIPIKKLPEYNWYKSYMFRIETLEGSRGYEDEIPE-EDIYN 338
****************************************9.88885 PP
Or compare biolip::2qm3A to CDD or PaperBLAST