biolip::5xncB has 354 amino acids
Query: BpsA_C [M=243]
Accession: PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-125 401.8 0.1 5.5e-125 401.5 0.1 1.1 1 biolip::5xncB
Domain annotation for each sequence (and alignments):
>> biolip::5xncB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 401.5 0.1 5.5e-125 5.5e-125 1 243 [] 109 353 .. 109 353 .. 0.99
Alignments for each domain:
== domain 1 score: 401.5 bits; conditional E-value: 5.5e-125
BpsA_C 1 dllekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslalaLtglpkkvvvvDiDeRlikfiervakelglk.ie 95
+lle+f+ei++dRPe+ +++Dq++vtpettvaRval+++rGDLe+ke++vlGdDDLts+al+L+glpk+++v+DiDeRl+kfie++a+e+g++ ie
biolip::5xncB 109 ELLEQFKEITRDRPEPAHQFDQAYVTPETTVARVALMHSRGDLENKEVFVLGDDDLTSVALMLSGLPKRIAVLDIDERLTKFIEKAADEIGYEnIE 204
689********************************************************************************************* PP
BpsA_C 96 aivyDlrkplpeelkekFdvfitDPpetvealkaFlgRGiaaLkgegcagYlgltrressldkWkeiqrlll.emgvvitdlirnFneYenweyke 190
++++Dlrkplp+++++kFd+fitDPpetvea++aF+gRGia+Lkg gcagY+g+trressldkW+eiqr+ll e+gvvitd+irnFneY+nw+y e
biolip::5xncB 205 IFTFDLRKPLPDYALHKFDTFITDPPETVEAIRAFVGRGIATLKGPGCAGYFGITRRESSLDKWREIQRVLLnEFGVVITDIIRNFNEYVNWGYVE 300
************************************************************************9*********************** PP
BpsA_C 191 etraakllpvkkkpekiwyksalfrietlkgkrkveeevkkveelykdeesst 243
etra++llp+k kp ++wyks++fri+tl+g++++e+e++ +ely deesst
biolip::5xncB 301 ETRAWRLLPIKVKPSYNWYKSYMFRIQTLEGSKGFEDEITVGQELYDDEESST 353
**************************************************986 PP
Or compare biolip::5xncB to CDD or PaperBLAST