biolip::6j28A has 345 amino acids
Query: BpsA_C [M=243]
Accession: PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-115 368.4 0.0 9e-115 368.1 0.0 1.1 1 biolip::6j28A
Domain annotation for each sequence (and alignments):
>> biolip::6j28A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 368.1 0.0 9e-115 9e-115 3 242 .. 106 343 .. 104 344 .. 0.98
Alignments for each domain:
== domain 1 score: 368.1 bits; conditional E-value: 9e-115
BpsA_C 3 lekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslalaLtglpkkvvvvDiDeRlikfiervakelglkieaiv 98
+e+f ++ak+RPeai+++Dqg+vtpe+t+aRval++++GDLegke+lvlGdDDLt+la+aLtglpk+vvv+D+D+R+++f+er+ak++gl++ea+v
biolip::6j28A 106 AERFLAWAKERPEAIQDFDQGYVTPESTLARVALAWNWGDLEGKEVLVLGDDDLTGLAAALTGLPKRVVVLDADPRIVRFLERAAKAEGLPLEAHV 201
79********************************************************************************************** PP
BpsA_C 99 yDlrkplpeelkekFdvfitDPpetvealkaFlgRGiaaLkgegcagYlgltrressldkWkeiqrlllemgvvitdlirnFneYenweykeetra 194
+Dlr+plpe+++++F++f+tDP+e+ +l+aF+gRG+ aL+gegcagY+glt++e+sl+kW+++qr+lle+g+vit+l++ F++Yenw+y+e++ra
biolip::6j28A 202 HDLREPLPEAWVHAFHTFFTDPVEGPLGLQAFVGRGLLALEGEGCAGYVGLTHVEASLAKWADFQRFLLENGAVITELRDGFHVYENWGYIEQMRA 297
************************************************************************************************ PP
BpsA_C 195 akllpvkkkpekiwyksalfrietlkgkrkveeevkkve.elykdeess 242
+ +lpvk++pek+wy+sal+r+e+l r+++ e+++ve +ly deess
biolip::6j28A 298 WPWLPVKRRPEKPWYTSALIRLELL---RRADLENARVEgDLYDDEESS 343
*************************...999999999984578888887 PP
Or compare biolip::6j28A to CDD or PaperBLAST