PaperBLAST – Find papers about a protein or its homologs

 

Align XP_024348284.1 to PF01868 (RNase_P-MRP_p29)

XP_024348284.1 has 249 amino acids

Query:       RNase_P-MRP_p29  [M=84]
Accession:   PF01868.20
Description: Ribonuclease P/MRP, subunit p29
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.1e-20   59.6   0.0    1.7e-20   59.1   0.0    1.3  1  XP_024348284.1  


Domain annotation for each sequence (and alignments):
>> XP_024348284.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   59.1   0.0   1.7e-20   1.7e-20       1      82 [.     123     208 ..     123     210 .. 0.95

  Alignments for each domain:
  == domain 1  score: 59.1 bits;  conditional E-value: 1.7e-20
  RNase_P-MRP_p29   1 akllkadlhGaeveVvrsknpslvGikGivvdEtkntlkivtkenk.....vktipKegsvFefelpeeekveikGsqlllrpedRa 82 
                      +++l++dl+Ga+++V+rs  +++v+++G+v  Et+n + ++t++++     + ++pK+g+v+ + +p + +v ++Gs l++rp dR+
   XP_024348284.1 123 ENVLRMDLIGARMRVLRSISTKQVDLEGVVTMETRNIFYLATEDDSnttaqLHIVPKRGTVLLLLMPGA-EVALNGSSLAYRPIDRT 208
                      5899**************************************9988899999**************887.9***************7 PP



Or compare XP_024348284.1 to CDD or PaperBLAST