CharProtDB::CH_125933 has 1398 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.5e-08 19.5 0.0 1.1e-07 18.3 0.0 1.6 1 CharProtDB::CH_125933
Domain annotation for each sequence (and alignments):
>> CharProtDB::CH_125933
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.3 0.0 1.1e-07 1.1e-07 67 160 .. 593 690 .. 544 691 .. 0.80
Alignments for each domain:
== domain 1 score: 18.3 bits; conditional E-value: 1.1e-07
Cas_Cas4 67 lvvvevKkskkiee.aaklQllyYlllLe.kkgieak.Gvleypkekkree.velteedreeleeaikeieeiissekppepkkkkiC 150
+ + e+K ++ + + ++ +Q l Y ll++ + gi+ + + l y+++ ++ v+ +++ r + + + +++ ++++ p +++kiC
CharProtDB::CH_125933 593 TLPLELKTGRYVDNiSHFAQSLLYTLLISdRYGINTNqALLCYLENSTIKNlVASNSQLRGLIMTRNSLAQHNFRRSLPEMISNRKIC 680
4568999999876526699*********99*******9999999999988845555555556666666666666776666778899** PP
Cas_Cas4 151 kkCayaelCl 160
+C++ Cl
CharProtDB::CH_125933 681 DHCSLVSECL 690
******9996 PP
Or compare CharProtDB::CH_125933 to CDD or PaperBLAST