SwissProt::A0Q5Y6 has 196 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-18 54.0 0.9 1.6e-18 53.5 0.9 1.3 1 SwissProt::A0Q5Y6
Domain annotation for each sequence (and alignments):
>> SwissProt::A0Q5Y6
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.5 0.9 1.6e-18 1.6e-18 4 159 .. 16 193 .. 13 195 .. 0.80
Alignments for each domain:
== domain 1 score: 53.5 bits; conditional E-value: 1.6e-18
Cas_Cas4 4 kinyyliCkrklwlfsh.eitmeeeselvelGklihe........esykrek............keveise.......sikiDvvkkekekl 67
i+++ +C+r +++ + i++++ +v++G+ h+ + + +++ ++ +D+v ++++++
SwissProt::A0Q5Y6 16 LIRQWCFCPRIVYYQELlAIKPNKP-LWVAQGEEFHKkveqlekrR-----SfsryglenairhFNLS--IksqkyklHGIVDWVIETDTNV 99
689999********99878888888.88889******666555552.....13334444466332333..134567779999********** PP
Cas_Cas4 68 vvvevKkskki.eeaaklQllyYlllLekkgieakGvleypkekkreevelteedreeleeaikeieeiissekpp.epkkkkiCkkCayae 157
+vve+K + + +klQ+++Y+ll+++ + + ++ + kk e+++t+e ++l ++i++i + ++s + p + ++ C +C+y++
SwissProt::A0Q5Y6 100 YVVEYKTNPNPnSLGHKLQIAAYALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGNKPdSSASDHQCIQCEYYN 191
******9866516688************999998888999999***********************999998865505566779******** PP
Cas_Cas4 158 lC 159
+C
SwissProt::A0Q5Y6 192 FC 193
** PP
Or compare SwissProt::A0Q5Y6 to CDD or PaperBLAST