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Align SwissProt::A0Q5Y6 to PF01930 (Cas_Cas4)

SwissProt::A0Q5Y6 has 196 amino acids

Query:       Cas_Cas4  [M=162]
Accession:   PF01930.17
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.1e-20   58.1   0.6    8.2e-20   57.7   0.6    1.2  1  SwissProt::A0Q5Y6  


Domain annotation for each sequence (and alignments):
>> SwissProt::A0Q5Y6  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.7   0.6   8.2e-20   8.2e-20       4     160 ..      16     193 ..      13     195 .. 0.79

  Alignments for each domain:
  == domain 1  score: 57.7 bits;  conditional E-value: 8.2e-20
           Cas_Cas4   4 kiqyyliCkrklwlish.eitleensetvelGkllhe........esyerek..........kevelse........sikiDvvekekeklv 68 
                         i+++ +C+r +++ +   i++++    v +G+  h+        +     +          ++++l          ++ +D+v +++++++
  SwissProt::A0Q5Y6  16 LIRQWCFCPRIVYYQELlAIKPNKP-LWVAQGEEFHKkveqlekrR-----SfsryglenaiRHFNL-SiksqkyklHGIVDWVIETDTNVY 100
                        68999*********99978898888.77777******555444442.....1444444546643333.134567888999************ PP

           Cas_Cas4  69 vvEvKkskkk.eeaaklQllyYlllLekkgveikeGvleypkekkreevelteelreelekaikeieeiisse.kppkvkkkkiCkkCayae 158
                        vvE+K   +  +  +klQ+ +Y+ll+++   +      ++ + kk  e+++t+el ++l k+i++i + ++s  kp++ ++ + C +C+y++
  SwissProt::A0Q5Y6 101 VVEYKTNPNPnSLGHKLQIAAYALLVQEYFAKPC-KTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGnKPDSSASDHQCIQCEYYN 191
                        *****9866516678************6655544.3667789999**********************9999986888899999********* PP

           Cas_Cas4 159 lC 160
                        +C
  SwissProt::A0Q5Y6 192 FC 193
                        ** PP



Or compare SwissProt::A0Q5Y6 to CDD or PaperBLAST