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Align VIMSS1244842 to PF01930 (Cas_Cas4)

VIMSS1244842 has 190 amino acids

Query:       Cas_Cas4  [M=162]
Accession:   PF01930.17
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      1e-16   47.6   0.3    1.4e-16   47.2   0.3    1.2  1  VIMSS1244842  


Domain annotation for each sequence (and alignments):
>> VIMSS1244842  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.2   0.3   1.4e-16   1.4e-16       4     160 ..      14     187 ..      11     189 .. 0.77

  Alignments for each domain:
  == domain 1  score: 47.2 bits;  conditional E-value: 1.4e-16
      Cas_Cas4   4 kiqyyliCkrklwlish.eitleensetvelGkllhe........esyerek..........kevelse........sikiDvvekekeklvvvEvK 73 
                    i+++ +C+r +++ +   i++++    + +G+  h+        +     +          ++++l          ++ +D+v +++++++vvE+K
  VIMSS1244842  14 LIRQWCFCPRIVYYQELlAIKPNKP-LWIAQGEEFHKkveqlekrR-----SfsryglnnaiRHFNL-SiksqkyklHGIVDWVIETDTNVYVVEYK 103
                   68999*********99988999988.66677******555444442.....1444445556643333.134567888999***************** PP

      Cas_Cas4  74 kskkk.eeaaklQllyYlllLekkgveikeGvleypkekkreevelteelreelekaikeieeiissekppkvkkkkiCkkCayaelC 160
                      +  +  +klQ+ +Y+ll+++   +      ++ + kk  e+++t+el ++l k+i++i + ++s + p  + +   ++C+y+++C
  VIMSS1244842 104 TNPNPnSLGHKLQIAAYALLVQEYFAKPC-KTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGNKPDSSAS---EQCEYYNFC 187
                   9866516678************6655544.3667789999*********************999999988876666...578899999 PP



Or compare VIMSS1244842 to CDD or PaperBLAST