VIMSS182047 has 171 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-19 56.7 0.0 1.9e-19 56.5 0.0 1.0 1 VIMSS182047
Domain annotation for each sequence (and alignments):
>> VIMSS182047
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 56.5 0.0 1.9e-19 1.9e-19 6 160 .. 11 169 .. 7 170 .. 0.85
Alignments for each domain:
== domain 1 score: 56.5 bits; conditional E-value: 1.9e-19
Cas_Cas4 6 nyyliCkrklwlfsheitmeeeselvelGklihe.......esykrekkeveise...sikiDvvkkekeklvvvevKkskkieeaaklQllyYlllL 93
+ C+r lwl +++ + ++++G+ + ++ e k v i+ ++++D++ ++ + +ve+K + + ++++k+Ql++ ++l+
VIMSS182047 11 LELEWCPRYLWLSKRHGVPMTP--NMAAGRGAEAglrrflaKALGAEPKPVYIDAgwaHGVVDILV-KRVAASPVEIKTGLP-RREHKWQLYAEAYLV 104
56789*********98877777..455667666655554433333355*****557999******9.8889999******99.889************ PP
Cas_Cas4 94 ekkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
+ g + G++ y + k ++++++++ +++e+ + ++ e+i+ pp+p+k+ +C C y+ +C
VIMSS182047 105 KAAGCAVYtGYITYGE--KIYRLQISKAELKAAETLLVKAAEVIEG-PPPPPVKTGKCAYCQYRAICT 169
**************97..577788999******************9.799999**************7 PP
Or compare VIMSS182047 to CDD or PaperBLAST