VIMSS3495267 has 190 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-15 44.3 0.0 1.5e-15 43.8 0.0 1.2 1 VIMSS3495267
Domain annotation for each sequence (and alignments):
>> VIMSS3495267
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 43.8 0.0 1.5e-15 1.5e-15 4 159 .. 9 180 .. 7 182 .. 0.83
Alignments for each domain:
== domain 1 score: 43.8 bits; conditional E-value: 1.5e-15
Cas_Cas4 4 kinyyliCkrklwlfsheitmeeeselvelGkliheesykrek.....keveise............sikiDvvkkekeklvvvevKkskki...ee 80
i++yl+C+ +++ + + e e+++ Gk + e+ + + + +++D++ +++ + evK sk+
VIMSS3495267 9 LIRQYLYCPAAAYYTATGQ-AEPPTERMRKGKEAQREAVEAVAkalgaE-----QvvhaprlsgagiCGVVDALLFIRGRPAPLEVKLSKPGravPL 99
599******9999988874.5667789999*****98888744134442.....2233345677877889999998889999999998877622145 PP
Cas_Cas4 81 aaklQllyYlllLe.kkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
+k+Q ++Y+l + + g ++++y ++ + + + lt++ e ++++ +i+++++ +p ++ + +C +C y+++C
VIMSS3495267 100 HHKAQAAAYALAAQaQYGKASPgAYIYYAETGEVKAIPLTRDLAELVKHTAAQIRRMMAGWTPDPRYHPAKCPSCWYRKIC 180
78************89999999899***********************************9888888999*********** PP
Or compare VIMSS3495267 to CDD or PaperBLAST