VIMSS501093 has 194 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.5e-28 83.6 0.0 9.7e-28 83.4 0.0 1.0 1 VIMSS501093
Domain annotation for each sequence (and alignments):
>> VIMSS501093
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 83.4 0.0 9.7e-28 9.7e-28 3 160 .. 13 182 .. 11 183 .. 0.92
Alignments for each domain:
== domain 1 score: 83.4 bits; conditional E-value: 9.7e-28
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvelGkliheesykr..ekkevei.se....sikiDvvkkekeklvvvevKkskkieeaa...klQllyYl 90
+k+n +++C+r+++l + + +++l+e G ++he++y++ e+ + + s+ +++D ++ +++++ +ve+K ++++eea +Ql++++
VIMSS501093 13 SKVNTVVYCPRRFYLEYVLGEAHANHHLIE-GHYLHERAYTEpgEESGLWVwSDrlglLGVVDRLEWRRGEACPVEYKLGRAKEEAYlsdAVQLAAQA 109
799***************999999999999.***********8766777777777888899**********************99865558******* PP
Cas_Cas4 91 llLe.kkgieak.Gvleypkekkreevelteedreeleeaikeieeiissekppepkkkk.iCkkCayaelCl 160
l+L+ ++gi+a+ G+++y+k+ r+ev +t e +++e a+ +++++++s +pp+++ + +C+ C+++ C
VIMSS501093 110 LCLReSRGIKARrGFVYYHKSHTRREVVFTPELFRAVEAAVVRMRALLQSPRPPRVEVPPsKCEGCSVQGACQ 182
****9*************************************************99876549*******9996 PP
Or compare VIMSS501093 to CDD or PaperBLAST