VIMSS7321367 has 180 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-21 62.0 0.0 4.6e-21 61.7 0.0 1.0 1 VIMSS7321367
Domain annotation for each sequence (and alignments):
>> VIMSS7321367
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 61.7 0.0 4.6e-21 4.6e-21 6 159 .. 15 172 .. 11 174 .. 0.87
Alignments for each domain:
== domain 1 score: 61.7 bits; conditional E-value: 4.6e-21
Cas_Cas4 6 nyyliCkrklwlfsheitmeeeselvelGkliheesykrek.......keveise...sikiDvvkkekeklvvvevKkskkieeaaklQllyYlll 92
+ C+r lwl +++ + +++ G++ ++ k+ k v i+ ++++D+v +++ +v+ve+K + + ++++k+Ql++ ++l
VIMSS7321367 15 LELEWCPRYLWLSKRHGVPTTP--SMAKGRQEEQALRKKLAaalgaepKPVYIDAgwtHGVVDMVA-RRHSAVPVEIKTGVP-RREHKWQLYAEAYL 107
56789**********9999998..6777**998844444223455567*****557999*******.9999*********99.889*********** PP
Cas_Cas4 93 Lekkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
++ +g ++ Gv+ y + ++++t ++ + +e + ++ e+++ pp+p+k+++C C y+ +C
VIMSS7321367 108 VKAQGHSVSlGVIAYGER--LARLQITPAELKVAEALLIKAAEVVEG-PPPPPRKTPKCAYCQYRPIC 172
***************985..66788999******************9.8999**************** PP
Or compare VIMSS7321367 to CDD or PaperBLAST