VIMSS753493 has 197 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-12 34.0 4.7 5.7e-12 32.2 4.7 1.7 1 VIMSS753493
Domain annotation for each sequence (and alignments):
>> VIMSS753493
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.2 4.7 5.7e-12 5.7e-12 3 159 .. 11 193 .. 9 195 .. 0.77
Alignments for each domain:
== domain 1 score: 32.2 bits; conditional E-value: 5.7e-12
Cas_Cas4 3 vkinyyliCkrklwlfsh.eitmeeeselvelGklihe...................esykrekkeveise...........sikiDvvkkekeklvv 69
+i++y +C+r +++++ +++++ +v+ G+ + + v + + +D + +++ ++++
VIMSS753493 11 NMIRQYCFCPRIVYYHMVvGLKVAYP-GWVQYGEEYQHkqqvldkrrtlskfkpiseQ-------AVLR-QntmlehpsypfYGICDGIIEDELEIIP 99
5899**********998868888777.8999998776656666555544333222221.......2222.13455556778888899999899999** PP
Cas_Cas4 70 vevKkskk.ieeaaklQllyYlllLe..kkgieakGvleypkekkreevelteedreeleeaikeieeiissekppepkkkk.iCkkCayaelC 159
+e+K+ + i+ +k+Ql++Y +l e + +G++ ++ k + ++++e+++ ++ e+ +i++i+ +e+ p + C +C++ + C
VIMSS753493 100 IELKSFASkISLGQKMQLTAYGMLSEliFEKPCTRGYIITGEKAKAKLIKIDEKSKFKVIEICAKIKKIFGTETLPYSTANGlQCIQCEFLNHC 193
*****865056677*******88766624445556**************************************99977766659*******999 PP
Or compare VIMSS753493 to CDD or PaperBLAST