PaperBLAST – Find papers about a protein or its homologs

 

Align A9WAV7 to PF01933 (CofD)

A9WAV7 has 391 amino acids

Query:       CofD  [M=290]
Accession:   PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.1e-45  139.2   0.0    4.6e-40  123.6   0.0    2.1  2  A9WAV7    


Domain annotation for each sequence (and alignments):
>> A9WAV7  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   13.5   0.1   1.6e-06   1.6e-06       1      34 [.     113     145 ..     113     158 .. 0.91
   2 !  123.6   0.0   4.6e-40   4.6e-40     121     279 ..     166     324 ..     152     329 .. 0.89

  Alignments for each domain:
  == domain 1  score: 13.5 bits;  conditional E-value: 1.6e-06
    CofD   1 ivvigGGtGlsklLrgLkkytaeitaivtvaDdg 34 
             +vvi+GG G+  +L+gL+++ +++t iv ++D +
  A9WAV7 113 VVVISGGAGM-LILSGLSDQVDRMTCIVPITDPV 145
             8********8.699******************76 PP

  == domain 2  score: 123.6 bits;  conditional E-value: 4.6e-40
    CofD 121 tdepvelhaeledgtvvegeskiseakk.aeakikrvfleped.akalpevleaieeAdlivlgPGslytSilPnLlvpgiaealreskakvvyvsnimtqpG 221
             t ep+e++ael+dgt +    +i  + + ae  ++++ l++++ ++ ++ +l+a++eAd+ivlgPGsl+ SilPn+l+p++aea+r+s+ak+++++n+mt+pG
  A9WAV7 166 TPEPLEVIAELDDGTLID-VRHIHLHPElAERYVRQLRLSQAAlPQLTRVTLDALREADAIVLGPGSLFESILPNFLLPEFAEAVRTSSAKKIFICNLMTEPG 267
             889************665.556666888788899997666655157888889*************************************************** PP

    CofD 222 etdgytvsdhvkailehlgkgyidavlvnteeipeellekyaeegaepvevDaeklek 279
              t+g+ v+dh+++i e +g    d+vlvn ++i++e+ + ya+++++pv +D ++ e+
  A9WAV7 268 RTSGFRVADHIRVIREFAG-ITPDYVLVNAQRIDPETTRIYAAAHQTPVYLDPSDYEE 324
             ******************9.669*****************************777665 PP



Or compare A9WAV7 to CDD or PaperBLAST