VIMSS103002 has 331 amino acids
Query: CofD [M=290]
Accession: PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.3e-118 380.1 0.7 4e-118 379.8 0.7 1.0 1 VIMSS103002
Domain annotation for each sequence (and alignments):
>> VIMSS103002
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 379.8 0.7 4e-118 4e-118 1 285 [. 6 286 .. 6 291 .. 0.99
Alignments for each domain:
== domain 1 score: 379.8 bits; conditional E-value: 4e-118
CofD 1 ivvigGGtGlsklLrgLkkytaeitaivtvaDdggssGrlreelgllppgDirnvlvaLadeeklleeLfqyrfkgdgdlaghslgnllLaalaeitg 98
+v igGGtGls++ rgL+++ +itaivtvaD+ggs+G++r+e+++++pgDirnv++aL+d+e++l++Lfqyrf+ +++++ghslgnll+a++++it+
VIMSS103002 6 VVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFE-ENQISGHSLGNLLIAGMTNITN 102
89*************************************************************************.9********************* PP
CofD 99 dleeaiealskvlavrgkvlPatdepvelhaeledgtvvegeskiseakkaeakikrvflepedakalpevleaieeAdlivlgPGslytSilPnLlv 196
d+ +ai+alsk+l+++g+v+P+t+++v+l+a++edg++v ge++i++++k ki+rvflep+d+++++e+++a++eAdlivlgPGslytS++ nL+v
VIMSS103002 103 DFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHK---KIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCV 197
*********************************************99999...********************************************* PP
CofD 197 pgiaealreskakvvyvsnimtqpGetdgytvsdhvkailehlgkgyidavlvnteeipeellekyaeegaepvevDaekleklgvevi 285
+gi++al +s+a+++yvsn+mtqpGetdgy+v+dh++ai++++g+ +id+v++ t+++++++l+ky+e++++pvev++++lek+ ++v
VIMSS103002 198 NGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKAELEKESINVK 286
******************************************************************************9****999986 PP
Or compare VIMSS103002 to CDD or PaperBLAST