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Align VIMSS1746411 to PF01933 (UPF0052)

VIMSS1746411 has 327 amino acids

Query:       UPF0052  [M=293]
Accession:   PF01933.18
Description: Uncharacterised protein family UPF0052
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.3e-69  220.7   0.0    1.6e-69  220.5   0.0    1.0  1  VIMSS1746411  


Domain annotation for each sequence (and alignments):
>> VIMSS1746411  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  220.5   0.0   1.6e-69   1.6e-69       1     257 [.       3     290 ..       3     317 .. 0.92

  Alignments for each domain:
  == domain 1  score: 220.5 bits;  conditional E-value: 1.6e-69
                   EEEEE-CHHHHHHHHHHCCSS...........CEEEEEE-----SHHHHHHHHHHTS---HHHHHHHHHH...--S-C..........HHHHHCH-B CS
       UPF0052   1 vvvlgGGtGlskllrglkevt...........aeltavvtvaDdggssGelrrelgllaigDirnvlval...idder..........lleeLfqyR 73 
                   ++vl GG+G++++l g++++            +eltavv+++Dd +++G       +++++D+++++++l   id +r          ++eeL++y 
  VIMSS1746411   3 ITVLVGGVGGARFLLGVQNLLglgsfadgpskHELTAVVNIGDDAWMHG-------VRICPDLDTCMYTLgggIDPDRgwghrnetwnAKEELAAYG 92 
                   89***********************************************.......*****************999999*****************6 PP

                   -SS......SSSSTT-BHHHHHHHHHHHHHS.-HHHHHHHHHHHTT-SSEEEES-SS--EEEEEETTS-E.....EE.STTTGGGG-S....-EEE. CS
       UPF0052  74 fkg......dgdlaghslgnllLaalaeltg.sleeaiealskilkvrgrvlPatddpvelsaeledGee.....it.geskiseark.lkapikr. 155
                   ++       d+dla+h+++ ++L+a     g +l++++eal+k++++++r+lPa+d++ e++++++d +      i+ +e+++   r+ +k+p+++ 
  VIMSS1746411  93 VQPdwfglgDRDLATHLVRSQMLRA-----GyPLSQVTEALCKRWQPGARLLPASDERSETHVVITDPTDgerraIHfQEWWV---RYrAKVPTHSf 181
                   665**********************.....99*********************************8777677799********...88899****** PP

                   EEEESTT----HHHHHHHHH-SEEEE-SS-IIIIIHHHHTSCCHHHHHHH-SSEEEEE--SB--TTTSTT-BHHHHHHHHHHCH-.....SS....S CS
       UPF0052 156 vflepegaeaapevleaikeAdlivlgpGslytSiiPiLlvpgiaealreskakkvlvsnimtqkGetdgfsvsdhvkaieravg.....kgvakay 247
                   +++++++a+a p+v+eai +Ad+++l+p+++++Si+PiL++pgi+ alr+++a++++ s+i+       g++++++++++++ +g     +    a+
  VIMSS1746411 182 AYVGADQATAGPGVVEAIGDADIVLLAPSNPVVSIGPILQIPGIRGALRSTSAPVIGYSPIIA------GKPLRGMADECLKVIGvestsQ----AV 268
                   **************************************************************8......****************865551....33 PP

                   ............-SEEEEE-S- CS
       UPF0052 248 ............vdavlvntse 257
                               +d +lv++++
  VIMSS1746411 269 geffgaragtglLDGWLVHEGD 290
                   555577777777******9983 PP



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