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Align VIMSS22782 to PF01933 (UPF0052)

VIMSS22782 has 296 amino acids

Query:       UPF0052  [M=293]
Accession:   PF01933.18
Description: Uncharacterised protein family UPF0052
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      3e-54  170.3   0.0    3.5e-54  170.1   0.0    1.0  1  VIMSS22782  


Domain annotation for each sequence (and alignments):
>> VIMSS22782  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  170.1   0.0   3.5e-54   3.5e-54       3     272 ..       3     275 ..       1     294 [. 0.89

  Alignments for each domain:
  == domain 1  score: 170.1 bits;  conditional E-value: 3.5e-54
                 EEE-CHHHHHHHHHHCCSSCEEEEEE-----SHHHHHHHHHHTS---HHHHHHHHHH...--S-C..........HHHHHCH-B-SS.....SSSSTT- CS
     UPF0052   3 vlgGGtGlskllrglkevtaeltavvtvaDdggssGelrrelgllaigDirnvlval...idder..........lleeLfqyRfkg.....dgdlagh 83 
                 vl+GGtG++kll+glkev a+  +vv++a+d++ sG         +++Di++v++a+   idde+          ++e+L ++ f++     d d a+h
  VIMSS22782   3 VLSGGTGTPKLLQGLKEV-ADFWVVVNTAEDVWVSG-------NKICPDIDSVIYAIaevIDDEKwwgikgdtfhTHERLKELGFDEgmrigDLDRATH 93 
                 9****************9.799**************.......9*************99999999******************99999999888***** PP

                 BHHHHHHHHHHHHHS.-HHHHHHHHHHHTT-SSEEEES-SS--EEEEEETTS-EEESTTTGGGG-S...-EEE.EEEESTT----HHHHHHHHH-SEEE CS
     UPF0052  84 slgnllLaalaeltg.sleeaiealskilkvrgrvlPatddpvelsaeledGeeitgeskisearklkapikr.vflepegaeaapevleaikeAdliv 180
                 +l+  +L+a     g sl ea++a++++ +v+++++P+++++v++ +++++Ge+  +e ++ ++   ++++k+  f + e+a++++ev e++++   ++
  VIMSS22782  94 ILRSEMLRA-----GkSLCEATKAVAEAYGVKQEIFPMCEEEVSTTVVTDEGEMHFQEFWVLRR--GEPEVKDvYFRGIEKARIPDEVKERLRKEKEVL 185
                 *********.....99*************************************655*****444..469****89999********************* PP

                 E-SS-IIIIIHHHHTSCCHHHHHHH-SSEEEEE--SB--TTTSTT-BHHHHHHHHHHCH-.....SS....S...-SEEEEE-S---HHHHHHHHTTT- CS
     UPF0052 181 lgpGslytSiiPiLlvpgiaealreskakkvlvsnimtqkGetdgfsvsdhvkaieravg.....kgvakay...vdavlvntsevpeellekyaaegk 271
                 +gp++++tSi+PiL v++++e l  +++k++++s+i++      +++vs+++ +++ra g     +gva+ y   +d ++v+++  ++ ++e+  a + 
  VIMSS22782 186 IGPSNPITSILPILSVEDFRERL--RDKKVIAISPIVG------EKAVSGPAGKLMRAKGyevsaRGVADVYadfLDLLVVDEA--DKGVMERSVATNT 274
                 ***********************..569*********9......9***************777663333333776999999988..7888877666443 PP

                 - CS
     UPF0052 272 e 272
                  
  VIMSS22782 275 I 275
                 3 PP



Or compare VIMSS22782 to CDD or PaperBLAST