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Align VIMSS242307 to PF01933 (UPF0052)

VIMSS242307 has 363 amino acids

Query:       UPF0052  [M=293]
Accession:   PF01933.18
Description: Uncharacterised protein family UPF0052
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.7e-75  240.0   0.0      2e-75  239.8   0.0    1.0  1  VIMSS242307  


Domain annotation for each sequence (and alignments):
>> VIMSS242307  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  239.8   0.0     2e-75     2e-75       1     262 [.      48     313 ..      48     335 .. 0.92

  Alignments for each domain:
  == domain 1  score: 239.8 bits;  conditional E-value: 2e-75
                  EEEEE-CHHHHHHHHHHCCSSCEEEEEE-----SHHHHHHHHHHTS---HHHHHHHHHH--S-C...HHHHHCH-B-SSSSSSTT-BHHHHHHHHHHH CS
      UPF0052   1 vvvlgGGtGlskllrglkevtaeltavvtvaDdggssGelrrelgllaigDirnvlvalidder...lleeLfqyRfkgdgdlaghslgnllLaalae 95 
                  vv+lgGG+Gls  l++l+++t +ltavvtvaDdggssG+lr+elg+l++gD+r+ l+al  d++   ++++++q+Rf+++gdl++h++gnll+ al e
  VIMSS242307  48 VVALGGGMGLSASLAALRRITGDLTAVVTVADDGGSSGRLRDELGVLPPGDLRKALAALCGDDDwgqTWARVIQHRFQSQGDLHEHAVGNLLIVALWE 145
                  8**********************************************************55555555******************************* PP

                  HHS-HHHHHHHHHHHTT-SSEEEES-SS--EEEEEETTS-E.........EESTTTGGGG-S...-EEEEEEESTT----HHHHHHHHH-SEEEE-SS CS
      UPF0052  96 ltgsleeaiealskilkvrgrvlPatddpvelsaeledGee.........itgeskisearklkapikrvflepegaeaapevleaikeAdlivlgpG 184
                    g+  +a++++ k+l+++grvlP++  p+el+a +  G+          ++g+ +++ +     ++++v+l p+++ a pe+++a+ +Ad++vlgpG
  VIMSS242307 146 QLGDHVQALDLVGKLLGAHGRVLPMSAVPLELQALV-RGHDperpdevdtVRGQATVALTPG---EVQSVHLVPSDPPAVPEAVDAVLDADWVVLGPG 239
                  ************************************.444446666666699*****66665...9******************************** PP

                  -IIIIIHHHHTSCCHHHHHHH-SSEEEEE--SB--TTTSTT-BHHHHHHHHHHCH-SS....S-SEEEEE-S---HHH CS
      UPF0052 185 slytSiiPiLlvpgiaealreskakkvlvsnimtqkGetdgfsvsdhvkaieravgkgvakayvdavlvntsevpeel 262
                  s+++S+iP+Llvp++ +al e+ka++vl +n+  q+Get+gfs ++h++ + r+++k      +d+vl+++++vp++ 
  VIMSS242307 240 SWFSSVIPHLLVPDLLDALVETKARRVLSLNLAPQPGETEGFSPQRHLEVLGRHAPKL----ALDVVLADEAAVPDRD 313
                  ********************************************************66....9********9887654 PP



Or compare VIMSS242307 to CDD or PaperBLAST