VIMSS35035 has 331 amino acids
Query: CofD [M=290]
Accession: PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-63 198.8 0.0 6.8e-63 198.5 0.0 1.0 1 VIMSS35035
Domain annotation for each sequence (and alignments):
>> VIMSS35035
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 198.5 0.0 6.8e-63 6.8e-63 1 253 [. 3 294 .. 3 318 .. 0.91
Alignments for each domain:
== domain 1 score: 198.5 bits; conditional E-value: 6.8e-63
CofD 1 ivvigGGtGlsklLrgLkkyt...............aeitaivtvaDdggssGrlreelgllppgDirnvlvaL...adeek..........lleeLfq 71
++v++GG+G++++L g++++ ++++a+v+v+Dd +++G l++++D+++++++L +d ++ +++eL++
VIMSS35035 3 VTVLAGGVGGARFLLGVQQLLglgqfaansahsdadHQLSAVVNVGDDAWIHG-------LRVCPDLDTCMYTLgggVDPQRgwgqrdetwhAMQELVR 94
89***************************************************.......***************9988888999999999******** PP
CofD 72 yrfkg......dgdlaghslgnllLaalaeitg.dleeaiealskvlavrgkvlPatdepvelhaeledgtv.....ve.geskiseakk.aeakikr. 155
y + d+dla+h++++++L+a g +l++++eal++++++ +++lPatd+++e+h++++d ++ +e+++ ++ a++++++
VIMSS35035 95 YGVQPdwfelgDRDLATHLVRTQMLQA-----GyPLSQITEALCDRWQPGARLLPATDDRCETHVVITDPVDesrkaIHfQEWWV---RYrAQVPTHSf 185
*6655**********************.....99*********************************7765556677********...555679****9 PP
CofD 156 vflepedakalpevleaieeAdlivlgPGslytSilPnLlvpgiaealreskakvvyvsnimtqpGetdgytvsdhvkailehlg.............. 240
f+++e+ +a+ e+++a+++Ad+i+l+P+++++Si+++L+vpgi+ alre++a++v s+i++ +++++++++++l+ +g
VIMSS35035 186 AFVGAEKSSAATEAIAALADADIIMLAPSNPVVSIGAILAVPGIRAALREATAPIVGYSPIIG------EKPLRGMADTCLSVIGvdstaaavgrhyga 278
***************************************************************......999999999999999977776665544443 PP
CofD 241 ...kgyidavlvntee 253
+g++d +lv++++
VIMSS35035 279 rcaTGILDCWLVHDGD 294
333335******9884 PP
Or compare VIMSS35035 to CDD or PaperBLAST