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Align VIMSS6585751 to PF01933 (UPF0052)

VIMSS6585751 has 444 amino acids

Query:       UPF0052  [M=293]
Accession:   PF01933.18
Description: Uncharacterised protein family UPF0052
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    7.3e-75  237.9   0.0    8.7e-75  237.7   0.0    1.0  1  VIMSS6585751  


Domain annotation for each sequence (and alignments):
>> VIMSS6585751  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  237.7   0.0   8.7e-75   8.7e-75       1     281 [.       3     429 ..       3     440 .. 0.93

  Alignments for each domain:
  == domain 1  score: 237.7 bits;  conditional E-value: 8.7e-75
                   EEEEE-CHHHHHHHHHHCCSS....CEEEEEE-----SHHHHHHHHHHTS---HHHHHHHHHH--S-CHHHHHCH-B-SSSSSST............ CS
       UPF0052   1 vvvlgGGtGlskllrglkevt....aeltavvtvaDdggssGelrrelgllaigDirnvlvalidderlleeLfqyRfkgdgdla............ 81 
                   vvv++GGt++++l+ ++++++    +elt++++++D+ggs++e++r +g++aigDir+++v+l++de+ l eLf +R+++d+ la            
  VIMSS6585751   3 VVVCSGGTATNSLTPCFSNISilkgHELTYILPISDNGGSTSEILRIVGGPAIGDIRSRIVRLLQDEQ-LVELFGHRLPNDKLLAkkewneivegsh 98 
                   8*******************************************************************.89*********9999999999******* PP

                   ......................................T-BHHHHHHHHHHHHH.S-HHHHHHHHHHHTT-.SS.EEEES..-SS--EEEEEETTS- CS
       UPF0052  82 ......................................ghslgnllLaalaelt.gsleeaiealskilkv.rg.rvlPa..tddpvelsaeledGe 135
                                                         ++s+gn++L++ a+l+ gsl+++ie++++i ++ +  +v+P+  t++++++sa l++Ge
  VIMSS6585751  99 piwknisievkemcrsfiihmqaellkkikhsnpfqfeSASIGNFFLTG-ARLFlGSLDASIELMMRIGRCsPLvHVIPCinTNHTHHISALLTNGE 194
                   *************************************************.999989***************8667********************** PP

                   EEESTTTGG................................................................GG-S....-EEE.EEEESTT--.. CS
       UPF0052 136 eitgeskis................................................................eark.lkapikr.vflepegae.. 164
                   +itg+s+is                                                                ++ + l+ap++r ++++p+g+e  
  VIMSS6585751 195 MITGQSQIShpsksvpkdnsiahsakfihllgsyddhlkillddeeeeaeeeyanpiyilpelknsqlhfdklDESQnLPAPVHRiLYINPYGEEik 291
                   ********8899**********************************************************999555559***************878 PP

                   ..--HHHHHHHHH-SEEEE-SS-IIIIIHHHHTSCCHHHHH.HH-SSEEEEE--SB--TTTSTT-BHHHHHHHHHHCH-.....SS....S...... CS
       UPF0052 165 ..aapevleaikeAdlivlgpGslytSiiPiLlvpgiaeal.reskakkvlvsnimtqkGetdgfsvsdhvkaieravg.....kgvakay...... 247
                      +p++++++k+Ad++v+++Gsl+tS++PiL++ ++ae + +++++kkvl++n+     e+ g++  ++v++i+++++     ++++k++      
  VIMSS6585751 292 pmGNPRAISKVKKADMVVYSIGSLMTSLLPILILGNLAEVIlESNNTKKVLLINNKY-DREVFGLDGLHYVQMIIDSMSraiagYRQSKGVhsendd 387
                   889*****************************************************6.77888****************666664445555999999 PP

                   ......-SEEE.EE-S..---HHHHHHHHTTT--B-B--HHHH CS
       UPF0052 248 ......vdavl.vnts..evpeellekyaaegkepvelDakle 281
                         +++++ ++++  e++e+++ek++ + ++  + D+ +e
  VIMSS6585751 388 fewqdfITDIVyLKNGeiEIDETIFEKHSIRCHQIASSDK-ME 429
                   9*99998888878777577888889888888777777774.33 PP



Or compare VIMSS6585751 to CDD or PaperBLAST