PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003734495.1 to PF01933 (CofD)

WP_003734495.1 has 322 amino acids

Query:       CofD  [M=290]
Accession:   PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.8e-111  356.9   1.1   4.4e-111  356.7   1.1    1.0  1  WP_003734495.1  


Domain annotation for each sequence (and alignments):
>> WP_003734495.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  356.7   1.1  4.4e-111  4.4e-111       1     290 []       9     292 ..       9     292 .. 0.99

  Alignments for each domain:
  == domain 1  score: 356.7 bits;  conditional E-value: 4.4e-111
            CofD   1 ivvigGGtGlsklLrgLkkytaeitaivtvaDdggssGrlreelgllppgDirnvlvaLadeeklleeLfqyrfkgdgdlaghslgnllLaalae 95 
                     +vvigGGtGl+++L+gLkk + ++taivtvaDdggssG++re++++lppgDirnv++aL++ ++ + +Lfqyrf+ dgdl+gh +gnl+L+al++
  WP_003734495.1   9 VVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALSQ 103
                     8********************************************************************************************** PP

            CofD  96 itgdleeaiealskvlavrgkvlPatdepvelhaeledgtvvegeskiseakkaeakikrvflepedakalpevleaieeAdlivlgPGslytSi 190
                     ++++  +ai+ l++vl++rgkv+Patd+p+ l+ae+edg++v+ges i+ ++k   +i+rv++epe++k+ p ++ea++eAdliv+gPGslytSi
  WP_003734495.1 104 LNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGK---HINRVYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSI 195
                     *************************************************9999...*************************************** PP

            CofD 191 lPnLlvpgiaealreskakvvyvsnimtqpGetdgytvsdhvkailehlgkgyidavlvnteeipeellekyaeegaepvevDaekleklgvevi 285
                     lPnLl+ ++a+++ +ska++vy+ ni tq Getd ++ +dh+k+i+eh+gk +id  l+nt+++p+ell     e+  +ve++a+ +e+lgve+i
  WP_003734495.1 196 LPNLLLTELADEIIASKAPKVYITNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLF---PEDVAQVEHNAKGMEELGVEAI 287
                     *******************************************************************995...68889***************** PP

            CofD 286 eadll 290
                      +d+l
  WP_003734495.1 288 YQDFL 292
                     99985 PP



Or compare WP_003734495.1 to CDD or PaperBLAST