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Align NP_001004883.1 to PF01937 (DUF89)

NP_001004883.1 has 440 amino acids

Query:       DUF89  [M=353]
Accession:   PF01937.19
Description: Protein of unknown function DUF89
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   1.8e-128  414.4   0.6     2e-128  414.3   0.6    1.0  1  NP_001004883.1  


Domain annotation for each sequence (and alignments):
>> NP_001004883.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  414.3   0.6    2e-128    2e-128       1     353 []      19     418 ..      19     418 .. 0.98

  Alignments for each domain:
  == domain 1  score: 414.3 bits;  conditional E-value: 2e-128
                     HHHTHHHHHHHHHHHHHHHHTCC........HHHHHHHHHHHHHHHHHHHHCTTCGHHH-HHHH....................T-BTTBSBHHH CS
           DUF89   1 tleerlpciltqviddlekakde........keeelkkiieelselkeelqtdkpltpledeee....................krswfnapwlf 67 
                     t+++rlp+ilt+vid+++++k++         +e++kk+++ +s+l++e+qtdkp+ pl+d++                     ++swf++pwl+
  NP_001004883.1  19 TIRDRLPQILTKVIDTVHRNKNKffedngeeGVEAEKKALSFFSKLRNEIQTDKPVLPLTDNQSdtelwnqyldyqktllnkgeTPSWFKSPWLY 113
                     789****************7777788888889***************************99999******************************* PP

                     HHHHHHHHHHHHHTHSGGGTTS-TTHHHHHHHHHHHHHHHHHHHHHHHHCCSH.........HHHHHHHHHHHHHHCG--CCCHTSHHCHHHHHH CS
           DUF89  68 aecylyrrllelfglskelknyDpFkeqKeesnksalkaveelakrleelede.........kelfkellkislwGNaiDlsllateediqkdqe 153
                     +ecy+yrr++e + ls+++++yD+F+e K+es+ +++ a+ +l+++l+el+++         ke++++ll+++lwGN +Dls++++ +++qk + 
  NP_001004883.1 114 VECYMYRRIQEGLVLSPPISEYDVFREGKTESFFQSQPAIIALCTYLQELKNNvanlsenqkKEELSKLLQVCLWGNKCDLSISGGLDNSQKFSI 208
                     *********************************************************************************************** PP

                     HHHHHHHHCTESEE-HHHHHHHH........CTCHTSEEEEE--BTTHHHHHHHHHHHHHHHCTTTSEEEEEEBSS--TTTB-BHHHHHHHHHHH CS
           DUF89 154 eearkaleknilvddleklwekl........kkkkakrvdivlDNaGfElvfDlllaeeLlesglatkVvlhvkaiPwfvsDvtpeDfewlleql 240
                      ++ +++  +ilv+d+e++w++l         k+  krvdivlDNaGfEl++D++la+ Ll+  la++V++h+k +PwfvsD t++Df+w++++l
  NP_001004883.1 209 LSSLESFMPFILVNDMESVWAVLsgsknlesGKELMKRVDIVLDNAGFELITDFVLADALLSLRLASEVHFHAKCMPWFVSDTTKHDFNWTIKHL 303
                     *****************************999999************************************************************ PP

                     H-TTTSHHHHCHTTHHHHHHTSEEEEESSCGGSSS--CCGSS.SHHHHHHHHHC-SEEEEEHHHHHHHHTTSCTTTTTSEHHHHT.GTSS--EEE CS
           DUF89 241 adsksfelsalgagldellkegklvlrgssfwttglsysemp.eapelyeelekadLvifKGdlNyrkLtgdrkwppttpfttal.gfspvpvla 333
                     ++++++++s++g +++e l+   ++++++ fwt++++++ m+ +ap+ly+el+k+dLvifKGdlNyrkLtgdrkw++t+pf +al  f+p+p+++
  NP_001004883.1 304 QAANHKWMSKCGVNWKENLQRSCWIYHEHLFWTLPHEFCMMAqTAPDLYSELQKSDLVIFKGDLNYRKLTGDRKWEFTVPFFQALtTFHPAPLCS 398
                     *********************************************************************************************** PP

                     EEE--SHHHHHHHSTTTHEE CS
           DUF89 334 LrtvKadvvagllegegekl 353
                     +rt+Kadv++gl +g+ge+l
  NP_001004883.1 399 IRTLKADVQVGLKPGVGEQL 418
                     *****************986 PP



Or compare NP_001004883.1 to CDD or PaperBLAST