PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q9UT55 to PF01937 (ARMT1-like_dom)

SwissProt::Q9UT55 has 438 amino acids

Query:       ARMT1-like_dom  [M=311]
Accession:   PF01937.23
Description: Damage-control phosphatase ARMT1-like domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    2.3e-94  302.1   0.0    2.6e-94  301.9   0.0    1.0  1  SwissProt::Q9UT55  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q9UT55  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  301.9   0.0   2.6e-94   2.6e-94       2     310 ..      24     415 ..      23     416 .. 0.97

  Alignments for each domain:
  == domain 1  score: 301.9 bits;  conditional E-value: 2.6e-94
     ARMT1-like_dom   2 aeerlpciltqviddlek........atdd....eeelkkileelaelkeelqkdkplppl...........................lfae 54 
                        + +r+ +ilt +++d+++        +  +    ++++k +l++l+ +k+++++d+pl pl                           l++e
  SwissProt::Q9UT55  24 FTRRWGIILTGIEKDVSErlsklastS--KdsevVAQGKPLLNDLEAFKSDIKNDRPLVPLegegqdiveyneelkqldnaswgnapwLYSE 113
                        679***************777776541..15689********************************************************** PP

     ARMT1-like_dom  55 cylyrrllellg......nyDpFkelKeesnekalklveelaekleelede.............kelfkellkialaGNviDlglla...ee 124
                        cy yrr++ +++       yDpF ++K++++++++++veela ++  le+e             ++ f e+++i+l+GN++Dl+ll+   +e
  SwissProt::Q9UT55 114 CYYYRRISLIFArysewkAYDPFFQQKDSTLKSSRAAVEELAGRYCLLEEElnsiakkgdshiaYMVFVEMAQISLWGNATDLSLLTnlsYE 205
                        ******************************************************************************************** PP

     ARMT1-like_dom 125 diekdqeeelrealeknllvddleklleklkkkkakrvlivlDNaGfElvfDlllieeLlesglatkvvlhvkgiP.ivnDvtleDaewlle 215
                        +++++q++++ e+++kn+lv+d++ +++klk+ +++r+++vlDNaGfEl++Dl+++ +Ll++g+a+++vlh+k++P +v+Dv++ D+e+ll 
  SwissProt::Q9UT55 206 ELQNLQGQKVVEESQKNILVNDFPTVWSKLKDVHNGRIDFVLDNAGFELYVDLIFAAYLLKAGIAKEIVLHPKDFPwFVSDVLPYDIEYLLT 297
                        ******************************************************************************************** PP

     ARMT1-like_dom 216 qlkdse......algaglde..klgklilsgsdfwtpgldleem...spelyeelekadLvifKGdlNyrkLtgdrdwppttp......... 287
                        +l +        +++++l++  ++g+l l++++fwt+ + + +m   ++ l+ elek+d++ fKGdlNyrkLtgd+ wp+ttp         
  SwissProt::Q9UT55 298 NLDTIFptesvtKFATDLRSfsAKGQLRLRTDPFWTTAHYFGRMpdfAAGLLTELEKSDMIFFKGDLNYRKLTGDCLWPRTTPfgktlgpia 389
                        ***999999*********************************************************************************** PP

     ARMT1-like_dom 288 ....vlaLrtaKcdvvagllgvgegek 310
                             +aLrt+K+dvv+gl+  g +ek
  SwissProt::Q9UT55 390 nainACALRTCKADVVVGLP-DGLYEK 415
                        ********************.888876 PP



Or compare SwissProt::Q9UT55 to CDD or PaperBLAST