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Align VIMSS208497 to PF01937 (DUF89)

VIMSS208497 has 335 amino acids

Query:       DUF89  [M=353]
Accession:   PF01937.19
Description: Protein of unknown function DUF89
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.1e-46  144.6   0.0    3.9e-46  143.6   0.0    1.4  1  VIMSS208497  


Domain annotation for each sequence (and alignments):
>> VIMSS208497  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  143.6   0.0   3.9e-46   3.9e-46       2     351 ..       4     329 ..       3     331 .. 0.82

  Alignments for each domain:
  == domain 1  score: 143.6 bits;  conditional E-value: 3.9e-46
                  HHTHHHHHHHHHHHHHHHHTCC...................................................HHHHHHHHHHHHHHHHHHHHCTTCG CS
        DUF89   2 leerlpciltqviddlekakde...................................................keeelkkiieelselkeelqtdkpl 48 
                    e+lpc+++q+++ l+ a ++                                                   +++++++i+++++e  ++l+  +++
  VIMSS208497   4 SLECLPCMMRQALRVLHLAVPDtmpadaeapdtsgqpaaplraegpctpcteaertgtgaaaaspcttstaraAHARREAIAKRFMERVSRLDFAESP 101
                  569***************77774443333444444555555555555555555555555555555555555555555555555555555555555555 PP

                  HHH-HHHHT-BTTBSBHHHHHHHHHHHHHHHHTHSGGGTTS-TTHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHCG--CCCHTSHH CS
        DUF89  49 tpledeeekrswfnapwlfaecylyrrllelfglskelknyDpFkeqKeesnksalkaveelakrleeledekelfkellkislwGNaiDlsllatee 146
                  + +                   +ly  ++e +g        Dp++  K ++n++al++++ l++r++++ed+   + ++l++s++GN+ D +  +   
  VIMSS208497 102 PGV-----------------LRHLYGMVREETG------VADPYAVEKAAANARALELLPGLRERVRKAEDP---LLTALHLSVIGNYLDAGTGI--- 170
                  555.................7899*********......*********************************...*****************888... PP

                  CHHHHHHHHHHHHHHCTESEE-.HHHHHHHHCTCHTSEEEEE--BTTHHHHHHHHHHHHHHHCTTTSEEEEEEBSS--TTTB-BHHHHHHHHHHHH-T CS
        DUF89 147 diqkdqeeearkaleknilvdd.leklweklkkkkakrvdivlDNaGfElvfDlllaeeLlesglatkVvlhvkaiPwfvsDvtpeDfewlleqlads 243
                    ++d e ++++++ +++     ++++ +k+   +   v++v DN+G E+ +D ll+ eLl+   + +V+++v++ P +++D+t+eD++         
  VIMSS208497 171 --EFDWEGALEREQSRDLAAGGtYARFSQKV--RQGAGVVVVGDNCG-EIALDTLLVSELLR--KGCNVTYAVRDVP-VLNDATLEDAD--------- 251
                  ..99999999999999996665488999999..9999**********.**************..8999*********.***********......... PP

                  TTSHHHHCHTTHHHHHHTSEEEEESSCGGSSS--CCGSSSHHHHHHHHHC-SEEEEEHHHHHHHHTTSCTTTTTSEHHHHTGTSS--EEEEEE--SHH CS
        DUF89 244 ksfelsalgagldellkegklvlrgssfwttglsysempeapelyeelekadLvifKGdlNyrkLtgdrkwppttpfttalgfspvpvlaLrtvKadv 341
                          + g++    ++++v++g +   +g++ +++  +p ++  l++ad++++KG++Ny+ + +  + +                ++ +++K++v
  VIMSS208497 252 --------AVGMTA---LCRVVSSGCD--APGTVADRC--SPAFLTLLARADVILAKGQGNYEGMNTT-HPD---------------AFYAFKAKCPV 318
                  ........9*****...**********..*********..*************************433.333...............8********** PP

                  HHHHH.STTTH CS
        DUF89 342 vagll.egege 351
                  +a++l +++g 
  VIMSS208497 319 IARELsVPQGT 329
                  ***99888775 PP



Or compare VIMSS208497 to CDD or PaperBLAST