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Align VIMSS3532055 to PF01937 (DUF89)

VIMSS3532055 has 292 amino acids

Query:       DUF89  [M=353]
Accession:   PF01937.19
Description: Protein of unknown function DUF89
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.6e-56  176.6   2.7    4.5e-56  176.3   2.7    1.1  1  VIMSS3532055  


Domain annotation for each sequence (and alignments):
>> VIMSS3532055  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  176.3   2.7   4.5e-56   4.5e-56       4     350 ..       6     278 ..       3     281 .. 0.95

  Alignments for each domain:
  == domain 1  score: 176.3 bits;  conditional E-value: 4.5e-56
                   THHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCTTCGHHH-HHHHT-BTTBSBHHHHHHHHHHHHHHHHTHSGGGTTS-TTHHHHHHHH CS
         DUF89   4 erlpciltqviddlekakdekeeelkkiieelselkeelqtdkpltpledeeekrswfnapwlfaecylyrrllelfglskelknyDpFkeqKeesn 100
                   +++ c l+q+++ +e+a+    e++k+++ el+++ ++l+ +++++                    + +  + +e+++      n+Dp+   K++sn
  VIMSS3532055   6 DCIHCYLKQAVSCMEMANIP-DERKKEVLYELMDFIKTLNPQDSPAYN-----------------SSLVLLKTYEIIQ------NNDPYYSAKKQSN 78 
                   8***************6666.6*****************999999988.................8889999999***......************* PP

                   HHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHCG--CCCHTSHHCHHHHHHHHHHHHHHCTESEE-HHHHHHHHCTCHTSEEEEE--BTTHHHHH CS
         DUF89 101 ksalkaveelakrleeledekelfkellkislwGNaiDlsllateediqkdqeeearkaleknilvddleklweklkkkkakrvdivlDNaGfElvf 197
                   + al+++e+++k++ e++d+   + e lk++++GN+iDl++++     ++d e+e++ a++  + +dd++ l +kl  +++k+++i  DNaG E+vf
  VIMSS3532055  79 ALALELFESVRKKVFESKDP---LYESLKAAVAGNVIDLGIKR-----EFDIESELSHAFDFGFSIDDYPLLKKKL--QNSKNIVIAGDNAG-EIVF 164
                   ********************...********************.....****************************..**************.**** PP

                   HHHHHHHHHHCTTTSEEEEEEBSS--TTTB-BHHHHHHHHHHHH-TTTSHHHHCHTTHHHHHHTSEEEEESSCGGSSS--CCGSSSHHHHHHHHHC- CS
         DUF89 198 DlllaeeLlesglatkVvlhvkaiPwfvsDvtpeDfewlleqladsksfelsalgagldellkegklvlrgssfwttglsysempeapelyeeleka 294
                   D +l+e L +  ++++V++ vk +P +++D+t+eD++                 + g+d+    +++v +g     +g++ + +  +++l + + + 
  VIMSS3532055 165 DKVLVEVLNQ--MGKNVYYIVKTKP-ILNDATLEDAK-----------------EVGMDK---IATIVETGLG--LLGIPKEFV--SSQLKQLILNV 234
                   **********..*************.***********.................******...**********..99**99999..*********** PP

                   SEEEEEHHHHHHHHTTSCTTTTTSEHHHHTGTSS--EEEEEE--SHHHHHHH.STTT CS
         DUF89 295 dLvifKGdlNyrkLtgdrkwppttpfttalgfspvpvlaLrtvKadvvagll.egeg 350
                   d+vi+KG++N+++L + ++ +              ++++L+++K++ +a+ l  ++g
  VIMSS3532055 235 DIVISKGQANFESLDEFEEIQD-------------NIFYLLKIKCEYLAKKLnFKHG 278
                   **************88777774.............7*************98866655 PP



Or compare VIMSS3532055 to CDD or PaperBLAST