biolip::2q40A has 343 amino acids
Query: ARMT1-like_dom [M=311] Accession: PF01937.23 Description: Damage-control phosphatase ARMT1-like domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.3e-62 195.2 0.0 1e-61 194.9 0.0 1.1 1 biolip::2q40A Domain annotation for each sequence (and alignments): >> biolip::2q40A # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 194.9 0.0 1e-61 1e-61 2 311 .] 44 337 .. 43 337 .. 0.95 Alignments for each domain: == domain 1 score: 194.9 bits; conditional E-value: 1e-61 ARMT1-like_dom 2 aeerlpciltqviddlekatddeeelkkileelaelkeelqkdkplppl...lfaecylyrrllellgnyDpFkelKeesnekalklveelaekl 93 +++ +p + +++++d++ +++ ++ +k++e++a ++e+l+kd++++ ++ c+l++++l+ lg++D+Fk++K+e+n+ka++l++++ + biolip::2q40A 44 FANSIPSFKKRAESDITVPDAP-ARAEKFAERYAGILEDLKKDPESHGGppdGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLS 137 56789*************9999.9999999999999999999999998888889***************************************** PP ARMT1-like_dom 94 eeledekelfkellkialaGNviDlgllaeediekdqeeelrealeknllvddleklleklkkkkakrvlivlDNaGfElvfDll.lieeLlesg 187 +++ed+ +++++l+++++aGN++ +++la ++++ + +++++ddle++++k+ +k++k+++i++DN+G+++++++l +++eLl+ biolip::2q40A 138 DAIEDDGKRLENLVRGIFAGNIF-MSFLA----------SCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILpFARELLR-- 219 **********************9.77777..........9*****************************************************.. PP ARMT1-like_dom 188 latkvvlhvkgiPivnDvtleDaewlleqlkdsealgagldeklgklilsgsdfwtpgldleemspelyeelekadLvifKGdlNyrkLtgdrdw 282 ++ +vvl++++ P +nD+t+++++++l+qlk+ + lg++ + + +sg+d p +dl+++s+el+ ++adLvi++G+ r+++++ ++ biolip::2q40A 220 RGAQVVLAANELPSINDITCTELTEILSQLKNGQLLGVDTSK--LLIANSGND--LPVIDLSRVSQELAYLSSDADLVIVEGM--GRGIETNLYA 308 *********************************887777777..788888888..**************9999**********..********** PP ARMT1-like_dom 283 ppttpvlaLrtaKcdvvagllgvgegekl 311 ++++++l++ ++K+ va++lg + ++++ biolip::2q40A 309 QFKCDSLKIGMVKHLEVAEFLGGRLYDCV 337 *********************99999876 PP
Or compare biolip::2q40A to CDD or PaperBLAST