PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS1957199 to PF01973 (MptE-like)

VIMSS1957199 has 604 amino acids

Query:       MptE-like  [M=171]
Accession:   PF01973.22
Description: 6-hydroxymethylpterin diphosphokinase MptE-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      3e-49  153.2   0.8      3e-49  153.2   0.8    2.5  3  VIMSS1957199  


Domain annotation for each sequence (and alignments):
>> VIMSS1957199  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.7   0.0      0.48      0.48      11      34 ..     156     179 ..     151     179 .. 0.72
   2 !  153.2   0.8     3e-49     3e-49       1     170 [.     190     365 ..     190     366 .. 0.91
   3 ?   -1.4   0.2     0.099     0.099     100     131 ..     509     539 ..     466     553 .. 0.72

  Alignments for each domain:
  == domain 1  score: -3.7 bits;  conditional E-value: 0.48
     MptE-like  11 lkpsleellnkf.kgnkpaiivgaG 34 
                   ++++++el +k  ++   +i+++ G
  VIMSS1957199 156 YSHQIQELNKKLiEN-IRFIVLAKG 179
                   456788888877455.888988877 PP

  == domain 2  score: 153.2 bits;  conditional E-value: 3e-49
     MptE-like   1 knllknlkeilk.psleellnkfkg.nkpaiivgaGPSLeknlellkelrdkaviiaadsalkaLlkegIkPDivvslDpqevsyevlkeaekkg.. 93 
                   k++l+nl+++l+   ++++l+  k+  k+aiiv++GPSL k+l+llk++++ka+i++adsa+++L+k++IkPD+v++l++++++ +++++ +k++  
  VIMSS1957199 190 KHMLNNLPKLLNhGVFQNFLKARKQkVKNAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEFdq 286
                   689*********999999999776668*****************************************************************99999 PP

     MptE-like  94 sivlvfasgvnpellkkykgpkl.flvtgttqa..lellseekgeilfgGgsvanaavdlAvelgfkeIiliGqDlayte 170
                    i+++++s+v+ e+++ ++++   ++  +  +   ++l+ +e+g+ + +G svan+a++lA++l+ ++Ii+iGqDlay +
  VIMSS1957199 287 GILFIISSVVHQEVIDFLEKNSRkYILVHRPLHfaVSLNLKEFGY-IGVGASVANMAYELAASLRHENIIFIGQDLAYAK 365
                   ****************99998777776666665565555567777.8*******************************87 PP

  == domain 3  score: -1.4 bits;  conditional E-value: 0.099
     MptE-like 100 asgvnpellkkykgpklflvtgttqalellse 131
                    s  n+++l k+k+++lf+++++   l+l++e
  VIMSS1957199 509 KSQLNSQTLIKIKKNLLFFFNEFKR-LKLFNE 539
                   5567778888888888888777555.444444 PP



Or compare VIMSS1957199 to CDD or PaperBLAST