PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS26963 to PF01973 (MptE-like)

VIMSS26963 has 627 amino acids

Query:       MptE-like  [M=171]
Accession:   PF01973.22
Description: 6-hydroxymethylpterin diphosphokinase MptE-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.3e-45  140.6   0.0    6.3e-45  139.2   0.0    1.8  1  VIMSS26963  


Domain annotation for each sequence (and alignments):
>> VIMSS26963  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  139.2   0.0   6.3e-45   6.3e-45       1     170 [.     205     377 ..     205     378 .. 0.94

  Alignments for each domain:
  == domain 1  score: 139.2 bits;  conditional E-value: 6.3e-45
   MptE-like   1 knllknlkeilk.psleellnkfkgnkpaiivgaGPSLeknlellkelrdkaviiaadsalkaLlkegIkPDivvslDpqevsyevlkeaekkg..siv 96 
                 k++++nl+e++k psl +++n  k++++aiiv++GPSL+k+l+llke++ +a+++++d+++++L+++gIkPDiv+sl++ ++++++++e+  ++   ++
  VIMSS26963 205 KQHVANLPEVIKsPSLVDFVNALKNRDTAIIVSTGPSLNKQLPLLKEIAPYATLFCIDASFPILARAGIKPDIVLSLERVDLTAKFYEETPLDFqeGVI 303
                 57899****************99999***************************************************************9988889*** PP

   MptE-like  97 lvfasgvnpellkkykgpkl.flvtgttqalellseekge.ilfgGgsvanaavdlAvelgfkeIiliGqDlayte 170
                 ++ +s+v+++l++++++  + f+++++++ ++l+ + +++  +  G+s an+a++l v+ +fk++++iGqDl++++
  VIMSS26963 304 FALTSIVHKRLIQAIQKGVKqFSFRPFGY-TNLF-DLHQYgYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQ 377
                 ***************999998*9999997.4555.66677789******************************986 PP



Or compare VIMSS26963 to CDD or PaperBLAST