PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS6581860 to PF02582 (DUF155)

VIMSS6581860 has 414 amino acids

Query:       DUF155  [M=173]
Accession:   PF02582.18
Description: RMND1/Sif2-Sif3/Mrx10, DUF155
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.2e-51  161.4   0.1    1.9e-51  160.8   0.1    1.3  1  VIMSS6581860  


Domain annotation for each sequence (and alignments):
>> VIMSS6581860  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  160.8   0.1   1.9e-51   1.9e-51       2     173 .]     156     350 ..     154     350 .. 0.92

  Alignments for each domain:
  == domain 1  score: 160.8 bits;  conditional E-value: 1.9e-51
        DUF155   2 fvfryGvvVfwglteeeekeflkklkkfaeeeskseeeeeetEeleyvyde...................ke.srikndlivlesd....sllakla 74 
                   ++ ++G++V+wg++e+  ++++ ++ k+a+ + + + e+ etE+++yv+ e                   +  s++++dli+++s      +l+k a
  VIMSS6581860 156 ILGQNGSIVSWGFSESSVRNCIVPIVKAASLN-PLNGEDFETEDMDYVEIEgeqdfdklssldnkvtpriACeSFLSGDLIIINSLdsdqGMLDKAA 251
                   5569**********************997766.99999999*********9988887777777766666633366********55559999****** PP

        DUF155  75 iShalaqSvkLsvlEeslekllestesipeeLaktgklklsrkellkkiGellklradlnlkselldtPdlfWeepeleklYealseyleikeRiev 171
                   +S++l++S+ L+vlEe++ek++++t++i+e+++k+ kl+l++++ lk+iG+l+++r +lnl+sel++tPdl+W+ep+le++++++s+yl+i +Ri++
  VIMSS6581860 252 FSSGLSRSTNLAVLEEAMEKHISKTRTITENISKGTKLNLRSSDALKSIGRLFLIRGKLNLYSELIETPDLYWSEPQLEEIFKNVSRYLDIGPRINI 348
                   ************************************************************************************************* PP

        DUF155 172 Ln 173
                   Ln
  VIMSS6581860 349 LN 350
                   *9 PP



Or compare VIMSS6581860 to CDD or PaperBLAST