PaperBLAST – Find papers about a protein or its homologs

 

Align WP_001053167.1 to PF02622 (DUF179)

WP_001053167.1 has 187 amino acids

Query:       DUF179  [M=157]
Accession:   PF02622.19
Description: Uncharacterized ACR, COG1678
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-56  175.9   0.0    3.4e-56  175.7   0.0    1.0  1  WP_001053167.1  


Domain annotation for each sequence (and alignments):
>> WP_001053167.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  175.7   0.0   3.4e-56   3.4e-56       1     157 []      12     174 ..      12     174 .. 0.95

  Alignments for each domain:
  == domain 1  score: 175.7 bits;  conditional E-value: 3.4e-56
          DUF179   1 PsledpnFersVvllcehneegamGlvlNrpl.eltlkelleelleleaepaaee.....pvylGGPveqdrlfvlhsle..lessleisdglyl 87 
                     P+l+dp F+rsVv++cehn++gamG+++N+pl +l+++ +le+ l+++ ep++++      v+lGGP+++dr+f+lh+ +  + ss++isd++++
  WP_001053167.1  12 PALQDPIFRRSVVYICEHNQDGAMGIIINKPLeNLQIEGILEK-LKITPEPRDSAirldkAVMLGGPLAEDRGFILHTPPsrFASSIRISDNTVI 105
                     89******************************99*********.7888777776358*********************55679************ PP

          DUF179  88 tgsldilealaggagpeklrvflGyagWgagQLeeEieenaWlvvpasdeellfetppeelWeealrrlG 157
                     t+s+d+le+l ++++p++++v+lGya+W++gQLe+E+ +naWl++pa d ++lf+tp +e+W+ea++ +G
  WP_001053167.1 106 TTSRDVLETLGTQQQPSDVLVALGYASWDKGQLEQELLDNAWLTAPA-DLNILFKTPIAERWREAAKLIG 174
                     ***********************************************.888***************9998 PP



Or compare WP_001053167.1 to CDD or PaperBLAST