PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001392103.3 to PF02696 (SelO)

XP_001392103.3 has 618 amino acids

Query:       SelO  [M=465]
Accession:   PF02696.18
Description: Protein adenylyltransferase SelO
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.9e-125  404.6   0.0   3.7e-125  404.3   0.0    1.0  1  XP_001392103.3  


Domain annotation for each sequence (and alignments):
>> XP_001392103.3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  404.3   0.0  3.7e-125  3.7e-125      18     462 ..      56     581 ..      49     584 .. 0.87

  Alignments for each domain:
  == domain 1  score: 404.3 bits;  conditional E-value: 3.7e-125
            SelO  18 yydevaaaefpqkilrfrndalleelgldpeavkdedfieafgkf........qgiepllalrYhGyqFGeynpqLGDGRgflygqvrgkd.gel 103
                      y+ v+ +  +++ l+   ++ +++lgl+p +  + +f ++ +++         gi p+ a  Y G+qFG++++qLGDGR++ ++++ + +  + 
  XP_001392103.3  56 LYTFVRPEPAEESELLGVSQKAMKDLGLKPGEELSPKFKALVAGNdfywdeneGGIYPW-AQCYGGWQFGSWAGQLGDGRAISLFETTNPKtSTR 149
                     57788999999999999999999****************99998889999997889999.***********************999987653889 PP

            SelO 104 ydfgtKGsGrTPySRggDGrlvLkggvREvlasealhklgvrtsralslie.tgeklwRgdePsptrssvlvRlarshiRfGtferlkylkrldl 197
                     y++++KG+GrTPySR++DG++vL++++RE+++seal +lgv+t+rals++  +++k++R+     ++++++ R+a+s++R+Gtf+ l+++ + +l
  XP_001392103.3 150 YELQLKGAGRTPYSRFADGKAVLRSSIREYIVSEALSALGVPTTRALSITLlPQSKVLRE---RIEPGAIVARFAESWLRIGTFDLLRARGDREL 241
                     *************************************************999********...9******************************* PP

            SelO 198 lkkLldhvieeyypel..........adee..........................dkyalfyaelvervAelvAqWmaaGFchgVlNTDNmsit 256
                     +++L+ ++ ee ++            +  +                          ++ a++y+e+ +r+A++vA W+a+GF++gVlNTDN+si 
  XP_001392103.3 242 IRHLATYIAEEVFQGWealpamlpldQ--SqssevvdnpprhvswdqvegppgseeNRFARLYREIARRNAKTVAAWQAYGFMNGVLNTDNTSIY 334
                     ***********6665533343343321..134455566666666666666666666*************************************** PP

            SelO 257 GesfDYGPyaFldtydpkftaayfDyagrYsygnqpsicllNLealqeplaali...........................ekeeleaaleefke 324
                     G s+DYGP+aF+d++dp++t++++D+  rY+y+nqp+i+++NL +l e+l  li                           +++ ++++ +ef+ 
  XP_001392103.3 335 GLSLDYGPFAFMDNFDPQYTPNHDDHLLRYCYKNQPTIIWWNLVRLGESLGELIgagedvdkeefvkdgvteevapaiiqrAEKVIDRTGKEFRM 429
                     ******************************************************9999999888888888888888877766667777777**** PP

            SelO 325 vyetkYrqlmlkkLGleelseeeaeelleetlelLketqvdYheffaeLaeef.....skkwrddaelileesel........eleeealeewre 406
                     v+ ++Y++lm+++LGl++ +e+  + l++e+l+ L++ ++d+++ff++L++       +k++r+++++i+ ++e         + +++++ +w +
  XP_001392103.3 430 VFLNEYKRLMSNRLGLRSQKETDFQVLFSELLDTLEALELDFNHFFRRLSSVSlsdieTKEMREKTASIFFHNEGhggigyteDSARQRVGDWLD 524
                     ****************99999999**********************9987765111114555566666655555456666553345599****** PP

            SelO 407 lY.kklleqleeeeleeiaerlkkvNpktvllrplieevieaiaeeddwqplkklle 462
                      + ++++e+   ++  e+++++k++Npk+ ++ ++++evie+++++ d + l ++++
  XP_001392103.3 525 KWrQRIIEDWGVDQDMERQKIMKNTNPKFLPRGWILDEVIERVERRGDREVLGRVMH 581
                     **5567888999***********************************9998887765 PP



Or compare XP_001392103.3 to CDD or PaperBLAST