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Align VIMSS18932 to PF03235 (DUF262)

VIMSS18932 has 658 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.3e-26   80.2   5.1    1.3e-26   80.2   5.1    4.2  4  VIMSS18932  


Domain annotation for each sequence (and alignments):
>> VIMSS18932  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.2   5.1   1.3e-26   1.3e-26      39     220 ..       2     172 ..       1     173 [. 0.76
   2 ?   -8.5  12.7         1         1     109     161 ..     195     270 ..     174     456 .. 0.63
   3 ?   -8.0  11.5         1         1     145     166 ..     490     531 ..     371     552 .. 0.53
   4 ?   -0.6  10.8     0.069     0.069     115     204 ..     515     599 ..     467     612 .. 0.51

  Alignments for each domain:
  == domain 1  score: 80.2 bits;  conditional E-value: 1.3e-26
      DUF262  39 kgyplGsivlw.skaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrreresdkellqkllrseklsleekeelae 136
                 +g+++Gsi+ + + ++ s+++l++iDGQQRltT+tlll a    + + +++ ++ +ek++ +e+e++l  + ++ dk++   l +s+k++l++++ +++
  VIMSS18932   2 NGHFIGSILYVlDSNTHSNNTLLIIDGQQRLTTITLLLIA----LRNHLSEEVEILEKFSRKEIESYLINSNKDGDKKFRLILSESDKDTLLSLIDKNK 96 
                 69********97767777**********************....5566666666666677777777777777777777777777888777777544444 PP

      DUF262 137 lnsltkkdlakeekrneeknlikayevieeilksa..llsalk...tklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                 ++            ++   ++ +++e++e++++++   l++++   +kl ++ i+l+  + +d+ + iFe++Ns+  +Lt+ +l+++++
  VIMSS18932  97 RKP-----------SEPSVKIVENFELFEKWISENtdKLETIFkglKKLMIVWISLD--KGKDDPQLIFESMNSKDIELTQTDLIRNYI 172
                 433...........6777778888888888888777733333223477788888888..56679***********************87 PP

  == domain 2  score: -8.5 bits;  conditional E-value: 1
      DUF262 109 eresdkellqkllrseklsleekeelaelnsltkkdl.......................akeekrneeknlikay 161
                 ++e+++ l+++++r++ + ++ k++++++    +kd+                       +   k++ +k l+ka+
  VIMSS18932 195 RFEQNETLFNRFVRHYLTIKIGKIPNEKRVYEAFKDYrqkkgieiedllkdlqkycgyfcQIAFKKEDDKDLNKAL 270
                 3344444444445544444444444444444444444222222222223333333333333333333333333333 PP

  == domain 3  score: -8.0 bits;  conditional E-value: 1
      DUF262 145 l....................akeekrneeknlikayeviee 166
                 l                     k +k+++ek+ ++ y++ +e
  VIMSS18932 490 LadwalkiwtypileaetleeYKPKKEKKEKKEKEEYKLKKE 531
                 122222222222223333333222222222222222222222 PP

  == domain 4  score: -0.6 bits;  conditional E-value: 0.069
      DUF262 115 ellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksallsalktklslieieleseddedqayeiFerlN 204
                 +  +++ ++e+ +l+++++ ++l+s++++  ++e ++ ++++++++ e i+e+++++   +    +++++i++ ++  +++  +++ ++N
  VIMSS18932 515 KEKKEKKEKEEYKLKKEKKVYDLSSYKFSSDSRELFDILREKIKALDERITEKFNQK---Y--IAYKFCKISFVDIVVQEKGLKLYLKMN 599
                 111222222222222233344444444444444444444444444444444443332...2..466677777777777777888888887 PP



Or compare VIMSS18932 to CDD or PaperBLAST