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Align VIMSS19820 to PF03235 (DUF262)

VIMSS19820 has 578 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.9e-43  135.3   8.4    1.9e-43  135.3   8.4    2.8  2  VIMSS19820  


Domain annotation for each sequence (and alignments):
>> VIMSS19820  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.3   8.4   1.9e-43   1.9e-43       2     220 ..      13     235 ..      11     236 .. 0.80
   2 ?   -6.0   7.6         1         1      90      90 ..     458     458 ..     262     576 .. 0.64

  Alignments for each domain:
  == domain 1  score: 135.3 bits;  conditional E-value: 1.9e-43
      DUF262   2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleaeie 94 
                 +++l +++  +++Pd+QRpyvW++++   Li+dl+         +y++Gsiv+  ++++++++++v+DGQQRlt++++l++         i +l++++ 
  VIMSS19820  13 HQILVDRDYFYQVPDYQRPYVWDKDHLGALIDDLVGsytnnrEDEYFCGSIVI--VENQKDKRWDVVDGQQRLTSFIILACT--------ILRLYKHSL 101
                 56777777768***********************99*****99**********..78888**********************........444444433 PP

      DUF262  95 k.ekeeededrlkrr.eresdkellqkllrseklslee.keelaelnsltkkdlakeekrneeknlikayevieeilksa...........llsalktk 179
                 + e+++ +ed+++ r  +e+ + ++ + +++++  ++  ++ l+++ + +k++l   +k+ ee++++++  +++e l++            ++++++++
  VIMSS19820 102 GqESKDFIEDSIYDRyDKEKERLKFLTAQNYNSIFENTvLNHLEFEDNIKKSEL---NKKFEENTYLRNAYYFKELLNESvengsisdiddFVKWFYEH 197
                 344444444444333344444444444444444444444777777777777777...55999***********9988888******************* PP

      DUF262 180 lslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                 + l++i++ + d+   a +iF++lN+rG pL++ ++lk+ l
  VIMSS19820 198 IVLTRIICFEQDS---AMQIFQVLNDRGQPLSPIDILKSSL 235
                 ********96555...**********************987 PP

  == domain 2  score: -6.0 bits;  conditional E-value: 1
      DUF262  90 e 90 
                 e
  VIMSS19820 458 E 458
                 3 PP



Or compare VIMSS19820 to CDD or PaperBLAST