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Align VIMSS246806 to PF03235 (DUF262)

VIMSS246806 has 605 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.9e-29   88.9   0.0      8e-29   87.5   0.0    1.7  1  VIMSS246806  


Domain annotation for each sequence (and alignments):
>> VIMSS246806  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.5   0.0     8e-29     8e-29       1     220 [.       9     253 ..       9     254 .. 0.70

  Alignments for each domain:
  == domain 1  score: 87.5 bits;  conditional E-value: 8e-29
       DUF262   1 ledllskskrg.lriPdfQRpyvWeeeqveeLiedllalkgyplGsivlw................skaadsageleviDGQQRltTltlllaa.... 77 
                  l+d+l + ++g l++PdfQR+++W++++++  i  +   ++yplG +++                 + ++d a  l+++DGQQRlt+l+  l+     
  VIMSS246806   9 LKDVLADVASGsLQLPDFQRNWKWDDDRIRAIIATV--TLDYPLGVVMTLqtggatrfrsrtltgaQPDGDPAADLLLLDGQQRLTSLFQSLWLdapv 104
                  5778888888889***********************..*************************998777788******************99986566 PP

       DUF262  78 ....t.....keesekriknleaeiek.ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdl.........akeekrneekn 156
                      +     +  ++ +i++++  + +  ++       k+ +++ ++  + +l  +e +  + +++l +  ++++ +          ++         
  VIMSS246806 105 etadSrgkaiQRWYYVDIAKAVGPSADrDEAVVSVPADKVLRTDFNRTVVLDLSTTEAECAAGLFPLHFVFDAQRVNEwkrayikadEE--------- 193
                  54330333343333333333333333342222222333555666777777777777777777766666655322222232222222222......... PP

       DUF262 157 likayevieeilksa.........llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                              +++         +l+ +   +++  i l  +++ d+++ +Fer+N++GvpL+ +ell a +
  VIMSS246806 194 ------------RNWdrwgqfdeaVLQQV-RAFQVPMIRLAASTSMDAVCAVFERVNTGGVPLNVFELLTATY 253
                  ............22233344333333333.56899999999999*************************9987 PP



Or compare VIMSS246806 to CDD or PaperBLAST