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Align VIMSS246806 to PF03235 (DUF262)

VIMSS246806 has 605 amino acids

Query:       DUF262  [M=199]
Accession:   PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      6e-29   87.7   0.0    1.8e-28   86.1   0.0    1.8  1  VIMSS246806  


Domain annotation for each sequence (and alignments):
>> VIMSS246806  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.1   0.0   1.8e-28   1.8e-28       1     198 [.       9     253 ..       9     254 .. 0.65

  Alignments for each domain:
  == domain 1  score: 86.1 bits;  conditional E-value: 1.8e-28
       DUF262   1 ledllskkksg.fliPdyQRgyvWdeeqvedLiedikelrgyplGsivlw................keaededgkyeviDGQQRltTltlllka.... 77 
                  l+d+l +  sg +++Pd+QR+++Wd+++++  i ++   ++yplG +++                 +++ d    + ++DGQQRlt+l++ l+     
  VIMSS246806   9 LKDVLADVASGsLQLPDFQRNWKWDDDRIRAIIATV--TLDYPLGVVMTLqtggatrfrsrtltgaQPDGDPAADLLLLDGQQRLTSLFQSLWLdapv 104
                  5788888888889***********************..*************************987667777******************99997777 PP

       DUF262  78 ..................leed.....ekekeeeekl...klekreedkdffekllenekeelekleklkelngkkfkdl..seeekseseknlikay 147
                                       +      + +e+  ++   k  +++ ++  + +l  +e e    +  l  l+      +  +++  +e ++ +ika 
  VIMSS246806 105 etadsrgkaiqrwyyvdiA--KavgpsADRDEAVVSVpadKVLRTDFNRTVVLDLSTTEAEC---AAGLFPLH------FvfDAQRVNEWKRAYIKAD 191
                  7777777766665544430..13333311122222221112222222222222222222222...22222222......0221111122222222222 PP

       DUF262 148 elikek.........ai...eklklveielddeddedeafeiFerlNsrGvpLsaadllkall 198
                  e  + +         ++     +++++i l  +++ d ++ +Fer+N++GvpL+ ++ll a +
  VIMSS246806 192 EERN-WdrwgqfdeaVLqqvRAFQVPMIRLAASTSMDAVCAVFERVNTGGVPLNVFELLTATY 253
                  2222.1344444443223446899999999999**************************9987 PP



Or compare VIMSS246806 to CDD or PaperBLAST