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Align VIMSS27031 to PF03235 (DUF262)

VIMSS27031 has 567 amino acids

Query:       DUF262  [M=199]
Accession:   PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.1e-39  121.3   4.5    3.1e-39  121.3   4.5    2.9  2  VIMSS27031  


Domain annotation for each sequence (and alignments):
>> VIMSS27031  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  121.3   4.5   3.1e-39   3.1e-39       1     198 [.       5     213 ..       5     214 .. 0.75
   2 ?   -5.4   8.3         1         1     117     178 ..     295     371 ..     258     554 .. 0.70

  Alignments for each domain:
  == domain 1  score: 121.3 bits;  conditional E-value: 3.1e-39
      DUF262   1 ledllskkksgfliPdyQRgyvWdeeqvedLiedike.......lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka.....lee.d...ek 83 
                 ++++++++   + iP+yQR+y+W++++ +dL+ed++e         g+++G++v+  ++ed+++ y++iDGQQR+tT+++ll++     +ee +   +k
  VIMSS27031   5 IKEIFQEEG--YSIPNYQRDYAWKDKNFRDLWEDLEEaieynkkGYGHFIGTMVV-AKNEDNKKLYDIIDGQQRTTTIFMLLHVlvskqYEEdKretRK 100
                 688999876..9***********************99******99**********.778888**********************665542223134466 PP

      DUF262  84 ekeeeeklklekreedkdffekllenekeelek.leklkelngkkfkdlseeekseseknlikayelikek..............aieklklveieldd 167
                 + +++ +lkle   ++++ff++lle +++ +++ +ek              + ++e ++nl +++++i +k              +   lk+v   l++
  VIMSS27031 101 YLYQKGELKLEVASQNQSFFKTLLEVAEKGNIShCEK--------------DADTEGKQNLFEVLKAILDKisklseeevnerleV--LLKMVLMRLEE 183
                 6777777778888888888888888777776664433..............33344444444444444444454566677665432..35566666664 PP

      DUF262 168 eddedeafeiFerlNsrGvpLsaadllkall 198
                   d+ +a + F+++N+rGvpL   d+lk+ll
  VIMSS27031 184 -PDPGKAIRTFQSVNDRGVPLLLLDKLKSLL 213
                 .78899**********************998 PP

  == domain 2  score: -5.4 bits;  conditional E-value: 1
      DUF262 117 leklkelngkkfkdlseeekseseknlikayelikek..................aieklklveielddeddedeafeiF 178
                 + +lke ++ k k + ++  s+ ++ ++  ++l+ e+                  +    +l+++++++e d de  ++F
  VIMSS27031 295 KAELKEIKKSKLKSFIQSYVSDLKNFYQAFLDLLSEIdtnpttlkvmlinrinplF--FNSLIRLKINNELD-DETLKLF 371
                 33333333333333333333444444444433333334445544444443333221..23333333333322.3344444 PP



Or compare VIMSS27031 to CDD or PaperBLAST